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Protein Overview: gi|25403219, gi|...

General Information:
Name(s) found: gi|25403219 [NCBI NR]
gi|15219498 [NCBI NR]
gi|12320961 [NCBI NR]
Description(s) found:
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  • pir||G86471 unknown protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15219498|ref|NP_174745.1| Ulp1 protease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12320961|gb|AAG50606.1|AC079605_11 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9C6E3) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown protein [imported] - Arabidopsis thalianagi|12320961|gb|AAG50606.1| unknown protein [Arabidopsis thaliana]gi|15219498|ref|NP_174745.1| Ulp1 protease family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ulp1 protease family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • cysteine-type peptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1311 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRECVVFFSG RVGSGGLVLD AVVAKPRWCE VVPGRFFSWL WTLGVIAVVI LSARLLVVVV  60
   61 ATRGGILAFV LPDRRGLVTV EVRGWWLLAV RVRFGVLSSF SVLIYSERKL LGLTGSRFLS 120
  121 CKRGVFVSAG STSQEPSSQW DSNLPNRLFA TDHYPRGRLN VYSRPDILSF IKKVFDGTEE 180
  181 LDFILQSCFG PLFHLPVSRV ATSGKVIHAL LCRQLLTKKK YEFWTVFGGH PMRFSLLEFA 240
  241 SVTGLPCGEF PDEYDPEDSP VYDDGKKSYW NELIGPDKTV TLGDISAMLT KKRSKLSSDH 300
  301 KLKLTFLLIV DGVLIASNQT GRLTFKYVEM LADLEKFLLF PWGRESFMKT VEAMTPEKRI 360
  361 LAKSTGKRQL TNDPIQNLVK QLQQITFRLK GFPHALQLLA FRNIPGMVDL LKFDDTSLTI 420
  421 LHWKNLTHPT QLITLPQIHS LESNLKRPVD PLIGEDINVD QSWAEWDDEV KDRKVSYMNG 480
  481 LILTAHQFKK SDWPGGDATL PSIKSPKEKS SVVHKKHIVD RKKRLRVKSD PPKSKHSYST 540
  541 RFNQVVRLSD DEKSRLIVDL QNKVEELSNR VMKLEKKRKT VTFKRSRNLA FGFVPLSSRS 600
  601 KRQKSLEVPT QSQSSENPSH SHTLSDEQNE DFDIEHQSEQ KDDSWDVSPP LSHPSTIVQD 660
  661 DEFKKFQDES IDRTTLTNTV ITDDPMDVNH TPHESQDSEK DDATEDNPIY DTGAKDPNDN 720
  721 EPDDEGKIHF DSSANVSNKK QSPLEEHNIM EVNLEAGEAS QSVVEPHPDD PMEANSPDCN 780
  781 SPQGNAASLC ILKDPNDHEA DDEGKIQFDS SANLSQKEQS PLEQDNIMEE TLETVEASHS 840
  841 LLETQPEENI DNDHMTEVTL ESAATSHSVE LPQPDDPMEG NAASHSLLET QPEVNSDGDS 900
  901 MKLHVYINIQ VTLEMPASSH SVSEAQPEEK IGNDPMEDTM ETPPAAHSLT GFAMFSKKKV 960
  961 TMETAAAIHS GVCKDNTDPM KAMVVFVKPV FDTSSKADKE PQSSPTHSPN IVGTRNEDNN1020
 1021 SEHSNSTARE PDQYFELSDS SPARNREKPN LSQAEARLVA EFTSQPILET QALLPTLKKA1080
 1081 EYSQFVKTLS SSPNIEHLTK CGFLISNKFF VELAKPQQWV STLHMEVLVS LLSRRLRTTL1140
 1141 ENHRSAFVDP WFTSHLQAKF RAFNAAKVKS RVRWSEDMQR FIKGSKTEWF KDIDTIYAPM1200
 1201 IWNDCHWVGL SINLGIWSVE ILDPNTDLYD DAKNHGLQPF GWSRIDGIYK NLWSGDCGPV1260
 1261 AMKFLEIQAS DKLPDKKAEI TDKHVDAFRR QYAMDIYKQC VCSLYSSNVS D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] deduced N/A No confident structure predictions are available.
    2 View Details [135..391] MSA 4.136979 View MSA. No confident structure predictions are available.
    3 View Details [392..630] deduced N/A No confident structure predictions are available.
    4 View Details [631..700] deduced N/A No confident structure predictions are available.
    5 View Details [701..900] deduced N/A No confident structure predictions are available.
    6 View Details [901..1045] deduced N/A No confident structure predictions are available.
    7 View Details [1046..1311] PSI-BLAST 33.221849 Ulp1 protease C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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