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Protein Overview: gi|14334602, gi|...

General Information:
Name(s) found: gi|9454570 [NCBI NR]
gi|25518763 [NCBI NR]
gi|18394983 [NCBI NR]
gi|17104531 [NCBI NR]
gi|14334602 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|9454570|gb|AAF87893.1|AC015447_3 Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||H86346 hypothetical protein F24J8.3 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18394983|ref|NP_564138.1| VHS domain-containing protein / GAT domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17104531|gb|AAL34154.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14334602|gb|AAK59479.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 506 amino acids

    Gene Ontology:
    Cellular Component: Golgi stack [ISS]
    intracellular [IEA]
    Biological Process: intra-Golgi vesicle-mediated transport [ISS]
    intracellular protein transport [IEA][ISS]
    Molecular Function: protein transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANNAAACAE RATNDMLIGP DWAINIELCD IINMEPSQAK EAVKVLKKRL GSKNSKVQIL  60
   61 ALYALETLSK NCGESVYQLI VDRDILPDMV KIVKKKPDLT VREKILSLLD TWQEAFGGSG 120
  121 GRFPQYYNAY NELRSAGIEF PPRTESSVPF FTPPQTQPIV AQATASDEDA AIQASLQSDD 180
  181 ASALSMEEIQ SAQGSVDVLT DMLGALDPSH PEGLKEELIV DLVEQCRTYQ RRVMALVNTT 240
  241 SDEELMCQGL ALNDNLQRVL QHHDDKAKGN SVPATAPTPI PLVSINHDDD DDESDDDFLQ 300
  301 LAHRSKRESA RGTGQGNFNP ILPPPPSSMR PVHVDSGAMD FLSGDVYKPQ ETFENVKPPS 360
  361 TSQSSNHDYS APIFDEPVPQ SKSPEHALFT KPVYDQTEQL PPAPWETQEP RKYPPSMSAR 420
  421 TNKRPEYFQH NVPQHSSSAS ESSYDDLLGQ SRNLSLNPTA SAAPVTPPKK DDKPEDILFK 480
  481 DLMDFAKTRT SSSSSSKPNN QNNKPF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..205] PSI-BLAST 50.69897 Hrs
    2 View Details [206..316] PSI-BLAST 19.39794 ADP-ribosylation factor binding protein Gga1
    3 View Details [317..506] MSA 23.314997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.24093737575291 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.098272402754001 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle