YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: RMLCD_ARATH

General Information:
Name(s) found: RMLCD_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Arabidopsis thaliana GN=NRS/ER PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 301 amino acids

    Gene Ontology:
    Cellular Component: soluble fraction [IDA]
    plasma membrane [IDA]
    Biological Process: UDP-rhamnose biosynthetic process [IDA]
    dTDP-rhamnose biosynthetic process [IDA]
    Molecular Function: UDP-4-keto-rhamnose-4-keto-reductase activity [TAS]
    dTDP-4-dehydrorhamnose 3,5-epimerase activity [IDA]
    UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity [TAS]
    dTDP-4-dehydrorhamnose reductase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVADANGSSS SSFNFLIYGK TGWIGGLLGK LCEAQGITYT YGSGRLQDRQ SIVADIESVK  60
   61 PSHVFNAAGV TGRPNVDWCE SHKVETIRTN VAGTLTLADI CREKGLVLIN YATGCIFEYD 120
  121 SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF 180
  181 ITKIARYEKV VDIPNSMTIL DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI 240
  241 DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK 300
  301 A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..301] PSI-BLAST 67.0 dTDP-glucose 4,6-dehydratase (RmlB)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.26736023026862 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.68812524232244 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle