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Protein Overview: gi|7594534, gi|1...

General Information:
Name(s) found: gi|7594534 [NCBI NR]
gi|15228956 [NCBI NR]
gi|11358384 [NCBI NR]
Description(s) found:
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  • gi|7594534|emb|CAB88059.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15228956|ref|NP_191215.1| anac065 (Arabidopsis NAC domain containing protein 65); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||T49057 hypothetical protein T5P19.210 - Arabidopsis thaliana [NCBI NR]
  • (Q9LXY4) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11358384|pir||T49057 hypothetical protein T5P19.210 - Arabidopsis thalianagi|15228956|ref|NP_191215.1| no apical meristem (NAM) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 No apical meristem (NAM) family protein, NAM (no apical meristem)-like protein T26I12.90 - Arabidopsis thaliana, EMBL:AL132954 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ANAC065 | ANAC065 (Arabidopsis NAC domain containing protein 65); transcription factor | chr3:20966383-20967846 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ANAC065; transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: anac065, NAC065 | NAC domain containing protein 65 | chr3:20955404-20956867 FORWARD LENGTH=228 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • NAC domain containing protein 65 OS=Arabidopsis thaliana GN=T5P19_210 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 228 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: multicellular organismal development [ISS]
    regulation of transcription [IEA]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDFKIFTFS FAQSKYLENI REKTLTEVST SDIELLRRNS QPFRRATPCS LTVDLQANSF  60
   61 TPKLQSYLMM MPGRNKRKER SWPEPQTQPQ SEIPSSSSSL AADNMSPPST IAYVLPPGFK 120
  121 FMPNDKEVIN CYLKPYSDGN TNVLLNVPIH RVNIYESNPQ TLSGRNVATL TEDIGTQKWL 180
  181 PKRFKAGDGV VGNKRPLAYY VGKPSEGVKT DWLMQEYSLD HSSHNTTR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] MSA 1.103994 View MSA. No confident structure predictions are available.
    2 View Details [115..228] PSI-BLAST 40.154902 Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle