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Protein Overview: gi|12322731, gi|...

General Information:
Name(s) found: gi|15231935 [NCBI NR]
gi|12322731 [NCBI NR]
Description(s) found:
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  • gi|15231935|ref|NP_187469.1| phototropic-responsive protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|12322731|gb|AAG51355.1|AC012562_16 hypothetical protein; 15198-13181 [Arabidopsis thaliana] [NCBI NR]
  • (Q9C9Z7) Hypothetical protein [athaliana3702.FASTAC.txt]
  • hypothetical protein; 15198-13181 [Arabidopsis thaliana]gi|15231935|ref|NP_187469.1| phototropic-responsive protein, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Phototropic-responsive protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | phototropic-responsive protein, putative | chr3:2602264-2604281 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • protein binding / signal transducer [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein; 15198-13181 [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 612 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: response to light stimulus [IEA][ISS]
    Molecular Function: protein binding [IEA]
    signal transducer activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSRIDFLLI RCIKDSFLPY INCSIFSDVA GDITIVVDGE SFLLHKFPLV ARCGKIRKMV  60
   61 AEMKESSSNL SHTELRDFPG GSKTFELAMK FCYGINFEIT ISNVVAIRCA AGYLEMTEDF 120
  121 KEENLIARTE TYLEQVAFRS LEKSVEVLCS CETLYPQDIA ETAHIPDRCV EAIAVNACRE 180
  181 QLVLGLSRLN RGTESGELKR GDSPEWWIED LSALRIDYYA RVVSAMARTG LRSESIITSL 240
  241 MHYAQESLKG IRNCKERTKL DSGTFENEQR NVLEAIVSLF PNDNVPLSFL FGMLRVGITI 300
  301 NVAISCRLEL ERRIAQQLET VSLDDLLIPV VRDGDSMYDV DTVHRILVCF LKKIEEEEEY 360
  361 DEDCCYENET ENLTGSMCHS SLLKVGRIMD AYLAEIAPDP CLSLHKFMAL IEILPDYARV 420
  421 MDDGLYRAID MFLKGHPSLN EQECKSLCKF IDTQKLSQEA CNHVAQNDRL PMQMVVRVLY 480
  481 SEQLRMKNVM SGESGEGLLL SSQKHSSENP SRAVSPRDTY ASLRRENREL KLEISRVRVR 540
  541 LTELEKEQIL MKQGMMEKSG HGGTLLTSLS KGIGRISIFG GGPTEGKLRN ANRKSKSRLE 600
  601 RKTVRSRPES MF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] PSI-BLAST 25.221849 No description for 2nn2A was found.
    2 View Details [155..280] MSA 4.629995 View MSA. Confident ab initio structure predictions are available.
    3 View Details [281..438] deduced N/A No confident structure predictions are available.
    4 View Details [439..612] MSA 2.068988 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle