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Protein Overview: gi|11079522, gi|...

General Information:
Name(s) found: gi|25404172 [NCBI NR]
gi|15223663 [NCBI NR]
gi|11079522 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • pir||B96612 hypothetical protein F12K22.17 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15223663|ref|NP_176089.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11079522|gb|AAG29232.1|AC079732_3 hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 264 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: metal ion transport [IEA]
    Molecular Function: metal ion binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCWLKQPQG ITTMMGCWLT KSRENILDNV IVTDAKLKIS MNFEDCAKKI RKVACQFEVK  60
   61 SCITDIDDQK VLVSGDFNLH KLVKTLKKKT GKKIEIVTKN EKSSEDKVDD TVQNEDSKDE 120
  121 IVPQNADKPE TSIMEVEFDI PFLCEKYEKD FGKVISKCTG VETYVVDLEN KKVVVIGNFD 180
  181 KDELSRKLNK KMHQKIKKAE KERQEWESEM MLREAEEEKR LADIYEEIDK DRNVSLNPIT 240
  241 DYEKEMAKHY YMFSDENPNA CSIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..264] PSI-BLAST 21.69897 Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.246147507070597 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle