YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PP125_ARATH

General Information:
Name(s) found: PP125_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 482 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: RNA splicing [IGI]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLFSKSLC TSAAGANLKP PPADSAAIAK LILSSPNTTH QDDQFLLSTK TTPWTPNLVN  60
   61 SVLKRLWNHG PKALQFFHFL DNHHREYVHD ASSFDLAIDI AARLHLHPTV WSLIHRMRSL 120
  121 RIGPSPKTFA IVAERYASAG KPDKAVKLFL NMHEHGCFQD LASFNTILDV LCKSKRVEKA 180
  181 YELFRALRGR FSVDTVTYNV ILNGWCLIKR TPKALEVLKE MVERGINPNL TTYNTMLKGF 240
  241 FRAGQIRHAW EFFLEMKKRD CEIDVVTYTT VVHGFGVAGE IKRARNVFDE MIREGVLPSV 300
  301 ATYNAMIQVL CKKDNVENAV VMFEEMVRRG YEPNVTTYNV LIRGLFHAGE FSRGEELMQR 360
  361 MENEGCEPNF QTYNMMIRYY SECSEVEKAL GLFEKMGSGD CLPNLDTYNI LISGMFVRKR 420
  421 SEDMVVAGKL LLEMVERGFI PRKFTFNRVL NGLLLTGNQA FAKEILRLQS KSGSRLLRKF 480
  481 RL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..419] PSI-BLAST 40.09691 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    2 View Details [420..482] PSI-BLAST 4.09691 Crystal Structure of the Hypothetical protein VPA1032 from Vibrio parahaemolyticus, Northeast Structural Genomics Target VpR44

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.02652482814057 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle