YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: DYT1_ARATH

General Information:
Name(s) found: DYT1_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|75279008|sp|O81900.1|DYT1_ARATH RecName: Full=Transcription factor DYSFUNCTIONAL TAPETUM 1; AltName: Full=Transcription factor EN 49; AltName: Full=bHLH transcription factor bHLH022; AltName: Full=Basic helix-loop-helix protein 22; Short=bHLH 22; Short [NCBI NR]
  • pir||T05175 hypothetical protein T6K22.60 - Arabidopsis thaliana [NCBI NR]
  • gi|7268929|emb|CAB79132.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|3402752|emb|CAA20198.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15233596|ref|NP_193864.1| DYT1 (DYSFUNCTIONAL TAPETUM 1); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Transcription factor DYT1 OS=Arabidopsis thaliana GN=DYT1 PE=2 SV=1 [Swiss-Prot]
  • (O81900) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|3402752|emb|CAA20198.1| putative protein [Arabidopsis thaliana]gi|7487785|pir||T05175 hypothetical protein T6K22.60 - Arabidopsis thalianagi|15233596|ref|NP_193864.1| basic helix-loop-helix (bHLH) family protei [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Basic helix-loop-helix (bHLH) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: DYT1 | DYT1 (DYSFUNCTIONAL TAPETUM 1); DNA binding / transcription factor | chr4:11349933-11350705 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: DYT1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:11349922-11350694 FORWARD LENGTH=207 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis thaliana GN=DYT1 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 207 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: tapetal layer development [IMP]
    regulation of transcription [IMP][TAS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGGSRFQEP VRMSRRKQVT KEKEEDENFK SPNLEAERRR REKLHCRLMA LRSHVPIVTN  60
   61 MTKASIVEDA ITYIGELQNN VKNLLETFHE MEEAPPEIDE EQTDPMIKPE VETSDLNEEM 120
  121 KKLGIEENVQ LCKIGERKFW LKIITEKRDG IFTKFMEVMR FLGFEIIDIS LTTSNGAILI 180
  181 SASVQTQELC DVEQTKDFLL EVMRSNP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] PSI-BLAST 10.221849 Solution Structure of Max B-HLH-LZ
    2 View Details [129..207] MSA 1.316996 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle