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Protein Overview: gi|7447850, gi|5...

General Information:
Name(s) found: gi|7447850 [NCBI NR]
gi|7270051 [NCBI NR]
gi|5262759 [NCBI NR]
gi|15235964 [NCBI NR]
Description(s) found:
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  • pir||T10678 hypothetical protein F3L17.50 - Arabidopsis thaliana [NCBI NR]
  • gi|7270051|emb|CAB79866.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|5262759|emb|CAB45907.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15235964|ref|NP_194876.1| coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9SV21) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|5262759|emb|CAB45907.1| putative protein [Arabidopsis thaliana]gi|7447850|pir||T10678 hypothetical protein F3L17.50 - Arabidopsis thalianagi|15235964|ref|NP_194876.1| coatomer beta subunit, putative / beta-coat [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Coatomer beta subunit [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative | chr4:15264082-15267390 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • clathrin binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 971 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFPFHLSSQ IFFSFTFCAA PEKMDKSSTM LVHYDKGTPA VANEIKEALE GNDVEAKVDA  60
   61 MKKAIMLLLN GETIPQLFIT IIRYVLPSED HTIQKLLLLY LELIEKTDSK GKVLPEMILI 120
  121 CQNLRNNLQH PNEYIRGVTL RFLCRMKETE IVEPLTPSVL QNLEHRHPFV RRNAILAIMS 180
  181 IYKLPQGDQL FVDAPEMIEK VLSTEQDPSA KRNAFLMLFT CAEERAVNYL LSNVDKVSDW 240
  241 NESLQMVVLE LIRSVCKTKP AEKGKYIKII ISLLSATSSA VIYECAGTLV SLSSAPTAIR 300
  301 AAANTYCQLL LSQSDNNVKL ILLDRLYELK TLHRDIMVEL IIDVLRALSS PNLDIRRKTL 360
  361 DISLDLITHH NINEVVQMLK KEVVKTQSGE LEKNGEYRQM LIQAIHACAV KFPEVASTVV 420
  421 HLLMDFLGDS NVASALDVVV FVREIIETNP KLRVSIITRL LDTFYQIRAG KVCPCALWII 480
  481 GEYCLSLSEV ESGISTITQC LGELPFYSVS EESEPTETSK KIQPTSSAMV SSRKPVILAD 540
  541 GTYATQSAAS ETTFSSPTVV QGSLTSGNLR ALLLTGDFFL GAVVACTLTK LVLRLEEVQS 600
  601 SKTEVNKTVT QALLIMVSML QLGQSPVSPH PIDNDSYERI VLCIKLLCHR NDEMKKIWLE 660
  661 SCRQSFVKMI SEKQLREMEE LKAKTQTTHA QPDDLIDFFH LKSRKGMSQL ELEDQVQDDL 720
  721 KRATGEFTKD ENDANKLNRI LQLTGFSDPV YAEAYVTVHH YDIALEVTVI NRTKETLQNL 780
  781 CLELATMGDL KLVERPQNYS LAPERSMQIK ANIKVSSTET GVIFGNIVYE TSNVMERNVV 840
  841 VLNDIHIDIM DYISPAVCSE VAFRTMWAEF EWENKVAVNT TIQNEREFLD HIIKSTNMKC 900
  901 LTAPSAIEGE CGFLAANLYA KSVFGEDALV NVSIEKQTDG ALSGYIRIRS KTQGIALSLG 960
  961 DKITLKQKGS S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] deduced N/A No confident structure predictions are available.
    2 View Details [72..883] PSI-BLAST 37.522879 No description for 2h4mA was found.
    3 View Details [884..971] PSI-BLAST 35.09691 Alpa-adaptin AP2 ear domain, N-terminal subdomain; Alpa-adaptin AP2, C-terminal subdomain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.41

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle