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Protein Overview: LYK2_ARATH

General Information:
Name(s) found: LYK2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6091745|gb|AAF03457.1|AC010797_33 putative protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|15232204|ref|NP_186833.1| protein kinase family protein [Arabidopsis thaliana] [NCBI NR]
  • Protein LYK2 OS=Arabidopsis thaliana GN=LYK2 PE=2 SV=1 [Swiss-Prot]
  • (Q9SGI7) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein kinase [Arabidopsis thaliana]gi|15232204|ref|NP_186833.1| protein kinase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Protein kinase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | protein kinase family protein | chr3:296589-298641 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Protein kinase superfamily protein | chr3:296582-298634 REVERSE LENGTH=654 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 654 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: cell wall macromolecule catabolic process [IEA]
    protein amino acid phosphorylation [IEA]
    Molecular Function: ATP binding [IEA]
    protein tyrosine kinase activity [IEA]
    protein kinase activity [IEA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSVSKQYM TSLVVILLFI SLSSLSPTST SHSCDPVEEE EEASSFGYVC HSNLQKCHTF  60
   61 AILRAKPPFY SLSDLSRHLG LDADDEYVPK GQLLLIPIEC RCNGSIYEAS LIKNCVKGDT 120
  121 FRSVSQSLQG LTTCLSIREK NPHISEDKLG DNIKLRLAIR CSCPQEGVSN ASFLVTYPVG 180
  181 VRDSVSSLAV RFNTTEDAIV SANNKSGVVP LKPALIPLDH KPEKQGSRKR NPSKKKRSKM 240
  241 KLMIAVSSAI AGVCGLVTLM VFGYLHWKKE TQIQTQTQKW ISNKDPETRQ LSLSIRTTSD 300
  301 KKISFEGSQD GSILDSHNTV GTTTPRKPVL EIYAFEELEK ATENFSSSNH IKGSVYFGSL 360
  361 KGKDLAIKQV NADEMKRFDF GLLNDQSHYY NHNVIRVLGT CFREIDQDSY LVFEYARNGS 420
  421 LWDWIQNKLA IKNQFIESCY CFLAWKQRIK ICHDVAIALK YMHRINYVHG NIKSRNIFLN 480
  481 EDLRGKVGNF GMSKCVTNEL ATEENLIESS LSPASDIFAY GIIVMEVLSG QTPDMLLGLQ 540
  541 EVETTSLGTQ ETFVSEWSRL RRLLGDKEKL REVMDSTLGE SYSVDSAFEI ASIARDCTAE 600
  601 EAESRPSAVE IAERVSRLVD DDEDEEDEAV IDRESTLISE SSYKPLVKKS SIID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..211] PSI-BLAST 10.522879 Polygalacturonase inhibiting protein PGIP
    2 View Details [212..654] PSI-BLAST 58.39794 Abl tyrosine kinase, SH3 domain; Abl tyrosine kinase; Abelsone tyrosine kinase (abl)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.686492203566958 bayes_pls_golite062009
  • transferase activity
    		•  0.66841261245817 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.66326000691279 bayes_pls_golite062009
  • kinase activity
    		•  0.65753777854807 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.64444215862273 bayes_pls_golite062009
  • protein kinase activity
    		•  0.56587465829201 bayes_pls_golite062009
  • binding
    		•  0.0554152720226 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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