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Protein Overview: TI10A_ARATH

General Information:
Name(s) found: TI10A_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8954056|gb|AAF82229.1|AC069143_5 Contains similarity to an unknown protein T10D10.8 gi|6730756 from Arabidopsis thaliana BAC T10D10 gb|AC016529. ESTs gb|T14209, gb|BE038503, gb|AA650871, gb|AA597384, gb|H76606, gb|AI996806, gb|AI100291 come from this [NCBI NR]
  • gi|75174736|sp|Q9LMA8.1|TI10A_ARATH RecName: Full=Protein TIFY 10A; AltName: Full=Jasmonate ZIM domain-containing protein 1 [NCBI NR]
  • pir||C86325 T29M8.5 protein - Arabidopsis thaliana [NCBI NR]
  • gi|20148609|gb|AAM10195.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|19548055|gb|AAL87391.1| At1g19180/T29M8_5 [Arabidopsis thaliana] [NCBI NR]
  • gi|18394706|ref|NP_564075.1| JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|17473768|gb|AAL38322.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14532540|gb|AAK63998.1| At1g19180/T29M8_5 [Arabidopsis thaliana] [NCBI NR]
  • gi|12083250|gb|AAG48784.1|AF332421_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10A PE=1 SV=1 [Swiss-Prot]
  • (Q9LMA8) T29M8.5 protein (Hypothetical protein) (At1g19180/T29M8_5) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|20148609|gb|AAM10195.1| unknown protein [Arabidopsis thaliana]gi|19548055|gb|AAL87391.1| At1g19180/T29M8_5 [Arabidopsis thaliana]gi|17473768|gb|AAL38322.1| unknown protein [Arabidopsis thaliana]gi|14532540|gb|A [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: JAZ1, TIFY10A | JAZ1/TIFY10A (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding | chr1:6622303-6623262 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g19180/T29M8_5 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Contains similarity to an unknown protein T10D10.8 gi|6730756 from Arabidopsis thaliana BAC T10D10 gb|AC016529. ESTs gb|T14209, gb|BE038503, gb|AA650871, gb|AA597384, gb|H76606, gb|AI996806, gb|AI100291 come from this gene [nr-271106-contam.fasta]
  • | Symbols: JAZ1, TIFY10A | jasmonate-zim-domain protein 1 | chr1:6622312-6623271 FORWARD LENGTH=253 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 253 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: flower development [IMP]
    pollen development [IMP]
    response to jasmonic acid stimulus [IEP]
    jasmonic acid mediated signaling pathway [IMP]
    defense response to bacterium [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS  60
   61 RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS SSLPKEDVLK MTQTTRSVKP 120
  121 ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP 180
  181 HPRKTTTQEP IQSSPTPLTE LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT 240
  241 TGNMSWLGLA AEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..253] MSA 23.05399 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle