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Protein Overview: PAH1_ARATH

General Information:
Name(s) found: PAH1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6682235|gb|AAF23287.1|AC016661_12 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42572345|ref|NP_974268.1| lipin family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|186509922|ref|NP_001118604.1| lipin family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232716|ref|NP_187567.1| lipin family protein [Arabidopsis thaliana] [NCBI NR]
  • Phosphatidate phosphatase PAH1 OS=Arabidopsis thaliana GN=PAH1 PE=1 SV=1 [Swiss-Prot]
  • (Q9SF47) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|42572345|ref|NP_974268.1| lipin family protein [Arabidopsis thaliana]gi|15232716|ref|NP_187567.1| lipin family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Lipin family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | lipin family protein | chr3:2934958-2938678 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • | Symbols: | Lipin family protein | chr3:2934953-2938673 REVERSE LENGTH=904 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • | Symbols: ATPAH1, PAH1 | Lipin family protein | chr3:2934953-2938673 REVERSE LENGTH=904 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Lipin-like protein OS=Arabidopsis thaliana GN=F11F8_14 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 904 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: lipid metabolic process [IGI]
    cellular response to phosphate starvation [IGI]
    Molecular Function: phosphatidate phosphatase activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVGRVGSL ISQGVYSVAT PFHPFGGAID VIVVQQQDGS FRSTPWYVRF GKFQGVLKGA  60
   61 EKFVRISVNG TEADFHMYLD NSGEAYFIRE VDPAANDTNN LISGSENNNG NQNNGVTYRL 120
  121 EHSLSDSGTG ELREGFDPLS RLERTESDCN RRFYDFQDDP PSPTSEYGSA RFDNLNVESY 180
  181 GDSQGSDSEV VLVSIDGHIL TAPVSVAEQE AENLRLNTPQ FHLAPGDGTE FCEGNTEFAS 240
  241 SETPWDTEYI DKVEESSDTA NIASDKVDAI NDERNDLDSH SRDNAEKDSH DAERDLLGSC 300
  301 LEQSELTKTS ENVKSEEPGP TFEDRNLKEG EFPLRTIMEN DRSEDEVTIE SIDTLVDSFE 360
  361 SSTTQITIEE VKTTEGSRIS VDSNADSECK DEQTSAETAI LFNNQESSIS VDSNADSECK 420
  421 DEQPRISAET AILINNQEGG IIESEDQDSE RVSIDSTREE VDKDNEDRKT VVSVGVTSSV 480
  481 DEGEPDTDQR YELSLCKDEL RQGMGLSAAA EVFDAHMISK EEYINSATSI LESENLVVRI 540
  541 RETYMPWTKA ARIVLGKAVF DLDLDIQPDD VISVEENESP KPKDDETTIT PSSSGTRWRL 600
  601 WPIPFRRVKT VEHTGSNSSS EEDLFVDSEP GLQNSPETQS TTESRHESPR RQLVRTNVPT 660
  661 NEQIASLNLK DGQNMITFSF STRVLGTQQV DAHIYRWRWD TKIVISDVDG TITKSDVLGQ 720
  721 FMPFIGKDWT QSGVAKLFSA IKENGYQLLF LSARAIVQAY LTRNFLNNLK QDGKALPTGP 780
  781 VVISPDGLFP ALYREVIRRA PHEFKIACLE DIRKLFPTDY NPFYAGFGNR DTDELSYRKL 840
  841 GIPKGKIFII NPKGEVATGH RIDVKKSYTS LHTLVNDMFP PTSLVEQEDY NPWNFWKLPI 900
  901 EEVE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] Pfam 68.657577 No description for PF04571.6 was found. No confident structure predictions are available.
    2 View Details [107..363] deduced N/A No confident structure predictions are available.
    3 View Details [364..430] deduced N/A No confident structure predictions are available.
    4 View Details [431..668] deduced N/A No confident structure predictions are available.
    5 View Details [669..904] Pfam 96.19382 No description for PF08235.5 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle