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Protein Overview: NADE_ARATH

General Information:
Name(s) found: NADE_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Glutamine-dependent NAD(+) synthetase OS=Arabidopsis thaliana GN=At1g55090 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 725 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: nitrogen compound metabolic process [IEA][ISS]
    NAD biosynthetic process [IEA]
    Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [IEA][ISS]
    NAD+ synthase (glutamine-hydrolyzing) activity [IEA]
    ATP binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLKVATCN LNQWAMDFES NMKNIKASIA EAKAAGAVIR LGPELEVTGY GCEDHFLELD  60
   61 TVTHAWECLK ELLLGDWTDD ILCSIGMPVI KGAERYNCQV LCMNRRIIMI RPKMWLANDG 120
  121 NYRELRWFTA WKQREELEEF QLPIEISEAL EQKSVPFGYG YIQFIDTAVA AEVCEELFSP 180
  181 LPPHAELALN GVEVFMNASG SHHQLRKLDI RLNAFMGATH ARGGVYMYSN QQGCDGSRLY 240
  241 YDGCACIVVN GNVVAQGSQF SLRDVEVIIS QVDLDAVASL RGSISSFQEQ ASCKVKVSSV 300
  301 AVPCRLTQSF NLKMTLSSPK KIIYHSPQEE IAFGPACWMW DYLRRSGASG FLLPLSGGAD 360
  361 SSSVAAIVGC MCQLVVKEIA KGDEQVKADA NRIGNYANGQ FPTDSKEFAK RIFYTVFMGS 420
  421 ENSSEETKRR SKQLADEIGA WHLDVCIDGV VSAVLSLFQT VTGKRPRYKV DGGSNAENLG 480
  481 LQNIQARMRM VLAFMLASLL PWVHSKPGFY LVLGSSNVDE GLRGYLTKYD CSSADINPIG 540
  541 SISKMDLRLF LKWAATNLGY PSLAEIEAAP PTAELEPIRS DYSQLDEVDM GMTYEELSVY 600
  601 GRMRKIFRCG PVSMFKNLCY KWGTKLSPAE VAEKVKYFFK YYSINRHKMT VLTPSYHAES 660
  661 YSPEDNRFDL RQFLYNSKWP YQFKKIDEIV DSLNGDSVAF PEEEANSNKE IGVVAANSGD 720
  721 PSAGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..439] PSI-BLAST 60.69897 NIT-FHIT fusion protein, C-terminal domain; NIT-FHIT fusion protein, N-terminal domain
    2 View Details [440..725] PSI-BLAST 57.69897 E.coli NAD Synthetase, AMP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  2.8930848757764 bayes_pls_golite062009
  • catalytic activity
    		•  1.64442398754697 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.35962310800332 bayes_pls_golite062009
  • binding
    		•  1.19055167016953 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.724655038971066 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle