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Protein Overview: gi|18410039, gi|...

General Information:
Name(s) found: gi|25372780 [NCBI NR]
gi|18410039 [NCBI NR]
gi|12323666 [NCBI NR]
Description(s) found:
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  • pir||D96746 hypothetical protein T9N14.23 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18410039|ref|NP_565039.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12323666|gb|AAG51799.1|AC067754_15 hypothetical protein; 75067-63678 [Arabidopsis thaliana] [NCBI NR]
  • (Q9C7S8) Hypothetical protein [athaliana3702.FASTAC.txt]
  • hypothetical protein; 75067-63678 [Arabidopsis thaliana]gi|25372780|pir||D96746 hypothetical protein T9N14.23 [imported] - Arabidopsis thalianagi|18410039|ref|NP_565039.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to binding [Arabidopsis thaliana] (TAIR:AT4G27010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38969.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83957.1); similar to OSJNBa0053K19.25 [Oryza sativa (j [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein; 75067-63678 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to binding [Arabidopsis thaliana] (TAIR:AT4G27010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38969.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83957.1); similar to OSJNBa0053K19.25 [Oryza sativa (japonica cultivar-group)] (GB:CAE03517.2); contains domain PTHR22930 (PTHR22930) | chr1:27203395-27214784 REVERSE [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 2777 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAGKRKSDR NPTNVSDKLG LKDPLLRRLS SAAAVTNSFL QANDLFLSPS QTLRLESLIS  60
   61 SLPISPSPSS SSSAITTTTW FNRFLTSATE DEDDPRWCLY FRMSKSTFFS LYSILSHSSL 120
  121 PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN 180
  181 LLPNCYGVVG FGRFEVKGKL LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK 240
  241 LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH 300
  301 TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV 360
  361 NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA ENLSRRKLLL MVESTSDLED 420
  421 QGNEFFQEHK YADDALNSYL KVPVMAFRPS LEAKLRQLLH NICLHEFKLC SDTAKDFVKL 480
  481 LKGETGSDLL RLYFQSSPNF TELLEAWNLH HGKQGLSYIF SLIQTILSHP EGKSSDIGRA 540
  541 LDQFCRLLIE KKLLDIYKAL SNTKRLQNAA LSLLASIVRR GPGMASEMAR TFDFHGFPKQ 600
  601 APRRAFVEFA ISFLQVGKPS LLKSILEKKQ LYSQLLQGLE EDDDDTLASV LSTLKDKILV 660
  661 QESSLSPRLM SALFGPKTLE QLVIISERED GGIVNELAYD VLVKVCTDPS NGLMPDAYRK 720
  721 GNIKRLLALM KSLKATETGY PRDLLLAIIR GRPSLASAFF DEFPYNVEDF TSPYWFSSIS 780
  781 LAADLVSSVR MSSSFDFLNP DKPPSGGSEV HTIMKCICPR PFSQSLIARG MHHSVFLVKH 840
  841 GTLRFLWETL RLWDSFVTAW KLCSVDQIQA SLERDIIGEV ISFFPDFQVL WTVLKVSQKL 900
  901 SLKRKAELDI GLVDRKKRLK TSEMAVLEEL ASDMVIGGLG SDTNIFLEED TGDAQLTDQE 960
  961 DAENEYLGIV SEIWGSEFCS KPIASVDEAE MFFQIKLLDT LGIYVRSVPN VPKGLFDVFM1020
 1021 KFLSSSSITA VGNTLFQQCA IVRSSLSHLK GVSIGFSPLI VCILQKCVKL LNSESQAYSL1080
 1081 PNKSAVSLYV YSSLKYILQT QVDPRPLSCL VQSVLSEVVD GSKDSLCEWL PLRVLLLFTQ1140
 1141 SLSEPFILHS GRTTCRLADT SFAATLDEIK GLMRSITPDE VGGVVNAFSS ALICATPESI1200
 1201 LKNFASVMAV SWDLYGTSFS FLLSIIFLEK NFLGNLSKLS PDLFMRGLEL TVSRNLREGT1260
 1261 VDSEIDFADH SSTTEKIKSK MDIPDIESLA FSVFLEQTPF PVLLNEIMSM DISCLPEFPR1320
 1321 LTELLLLKVS QPKSDSIESD IRLILFWLFQ IRSLYKVQPH PVLCQQSEIC LRLMRHLFSQ1380
 1381 ISKLDLVSGP SADKLKHQVP QTVLSHPVVM ALLESPADCD TLPRVQNVEV FSETLLTAGR1440
 1441 LGISEIDQHI LDLLASTCEN FLFEESHIER KGDLRADKSI MAFKVLVERL LLVFRDKFEL1500
 1501 CVGSQSYAPL LQHPQLIQAL LKFISPFKLL YLAHSMLSKT YEEELASPIL SFGLDIAGGA1560
 1561 FEMLILYSRQ PAAKRRVYDF LWELEDKNYD SRIIEQVYSL ACRFSTSFGL ASADTCLLKV1620
 1621 VSGIFRGGNS QHCSVHQLTV IMSQIVGRTS KDLIIHCINQ ASMSRAKILF YLVESSPLHL1680
 1681 SVFGHIFFSM LSKLQGDSAL ITDDQFVMLL PPVLLFLASV FAKLEKSCSK CLDITSLYSN1740
 1741 ILIKGFLQWP KFCSGCIFEE KYEEILLSTS EDIETMFNAS LLGKAVRMFQ YHFALTESPT1800
 1801 KTDDLLKVFY SMFPHTSAGK EMLDYEIKEV DVKSVDQMFN ITNRLVAKVE LSRICLFPED1860
 1861 SCMHHLKRQA GGCVKESSPE MGSNRESLLN PLLNAFVNTW QCVVERSDGY YKGNSEREEQ1920
 1921 DKYWFLCKSL EYFILRSILK FLEGMCEELA HLDSLPFLER LMNLILRYRF KDSKTLKILR1980
 1981 EIFSFLSRGK YSYHFQDLVS HSQFTESISS LSISSSHTGE VIRPVSSILK LLIIPNLNSV2040
 2041 RVENCSLEAP EYYLSQIEIL KILGVLLCKC GKDSGIFLKD LHFRLLCSYG ATPSEIDLQS2100
 2101 YKLMHDIKLI VGEHTLNDSE DYLWGNAALK IREGLPSDGS YSDIVEDLRQ SLFKENLCLD2160
 2161 PKRCAQTVLY FPYGRTAEAS DNTYIYDDPI SEKCSPAIER YDPVFILRVS VQLLSMVYIE2220
 2221 PVEFASLGLL AVAFASMSSA DLGIRKLGYE TLGIFVDVLE GIPLFHDFFG SSTVNFRSQR2280
 2281 LWVLRLVFVG LESEEDAQIY IRNSILETVM GFFSSPLADD ETKGLILQVV RKSVKLHKMA2340
 2341 RHLVENCGLL SWCSSFFSML TTKPTGDEDS RFVVVLEVIT DALASRNDTE WSQRSALEGL2400
 2401 MEISSRLYTL LGDGLVSMQE NGTSILSATL KISHKRKKNQ PHFTITIEGI FQLFEAAANC2460
 2461 DSPQVEASAE GRLDTILMST PPVEIICMDV HRLRRFLLWG SSTALKSDLK KGSKPGECHQ2520
 2521 DTKTHTEETM VAKFLRWLLA SVILGKLYSE ANDSDQIVLS ETKPETLPTL LEYLKKRNLQ2580
 2581 GSVTNSEHII GEVIVYLQKH LLCRNYGVLL PSVVFALSLM VLRNGLETTG TESEGGYKVI2640
 2641 RSLCSRISSP TEAIPVWRWS YHQDLPSERA TDPKEIDELY ACQELLLIFS DMLRETPRES2700
 2701 QQTLLLGESF DMSSVFEWER VSSLSFPLLR FLPLLPQSSI SLTVLPTILS FTDSGDDSLE2760
 2761 ECVNGCEADD NGEQARA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.34

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle