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Protein Overview: DJ1B_ARATH

General Information:
Name(s) found: DJ1B_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7769869|gb|AAF69547.1|AC008007_22 F12M16.18 [Arabidopsis thaliana] [NCBI NR]
  • gi|20259561|gb|AAM14123.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18404397|ref|NP_564626.1| DJ-1 family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15810459|gb|AAL07117.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Protein DJ-1 homolog B OS=Arabidopsis thaliana GN=DJ1B PE=1 SV=1 [Swiss-Prot]
  • (Q9MAH3) F12M16.18 (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|15810459|gb|AAL07117.1| unknown protein [Arabidopsis thaliana]gi|7769869|gb|AAF69547.1| F12M16.18 [Arabidopsis thaliana]gi|18404397|ref|NP_564626.1| DJ-1 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DJ-1 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DJ-1 family protein | chr1:19868610-19871009 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • F12M16.18 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DJ-1 family protein [Arabidopsis thaliana] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • | Symbols: | Class I glutamine amidotransferase-like superfamily protein | chr1:19864942-19867341 REVERSE LENGTH=438 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Protein DJ-1 homolog B OS=Arabidopsis thaliana GN=DJ1B PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 438 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA  60
   61 HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK MVADTLLSDI TDSVFDLIML 120
  121 PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME 180
  181 KLAACATAVE SRVEIDGKIV TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD 240
  241 EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA 300
  301 SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA 360
  361 SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD GNLITSRGPG TSLEFALAIV 420
  421 EKFYGREKGL QLSKATLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..241] PSI-BLAST 35.0 Crystal Structure of Human DJ-1
    2 View Details [242..438] PSI-BLAST 30.522879 Crystal Structure of E. coli protein YajL (ThiJ)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.30391542469987 bayes_pls_golite062009
  • binding
    		•  1.22860407524238 bayes_pls_golite062009
  • ligase activity
    		•  0.606811845310629 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.34963817887651 bayes_pls_golite062009
  • omega peptidase activity
    		•  0.11699697380316 bayes_pls_golite062009
  • protein binding
    		•  0.0152024556625711 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.30391542469987 bayes_pls_golite062009
  • binding
    		•  1.22860407524238 bayes_pls_golite062009
  • ligase activity
    		•  0.606811845310629 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.34963817887651 bayes_pls_golite062009
  • omega peptidase activity
    		•  0.11699697380316 bayes_pls_golite062009
  • protein binding
    		•  0.0152024556625711 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle