YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: VP202_ARATH

General Information:
Name(s) found: VP202_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|9955513|emb|CAC05452.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|75173205|sp|Q9FY89.1|VP202_ARATH RecName: Full=Vacuolar protein sorting-associated protein 20 homolog 2; Short=AtVPS20-2; AltName: Full=Charged multivesicular body protein 6 homolog 2; AltName: Full=ESCRT-III complex subunit VPS20 homolog 2 [NCBI NR]
  • gi|51969450|dbj|BAD43417.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|34365667|gb|AAQ65145.1| At5g09260 [Arabidopsis thaliana] [NCBI NR]
  • gi|15242368|ref|NP_196488.1| VPS20.2 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2) [Arabidopsis thaliana] [NCBI NR]
  • Vacuolar protein sorting-associated protein 20 homolog 2 OS=Arabidopsis thaliana GN=VPS20.2 PE=1 SV=1 [Swiss-Prot]
  • (Q9FY89) Hypothetical protein [athaliana3702.FASTAC.txt]
  • At5g09260 [Arabidopsis thaliana]gi|9955513|emb|CAC05452.1| putative protein [Arabidopsis thaliana]gi|51969450|dbj|BAD43417.1| unknown protein [Arabidopsis thaliana]gi|15242368|ref|NP_196488.1| SNF7-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 SNF7-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: VPS20.2 | VPS20.2 | chr5:2876798-2878356 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At5g09260 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: VPS20.2 | vacuolar protein sorting-associated protein 20.2 | chr5:2876797-2878355 FORWARD LENGTH=216 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 216 amino acids

    Gene Ontology:
    Cellular Component: ESCRT III complex [ISS]
    plasma membrane [IDA]
    Biological Process: vesicle-mediated transport [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNLFVKKPK ITEVDRAILS LKTQRRKLGQ YQQQLEKVIE AEKQAARDLI REKRKDRALL  60
   61 ALKKKRTQEE LLKQVDQWLI NVEQQLADIE LTSKQKAVFE SLKQGNNAIK AIQSEVNLDD 120
  121 VQKLMDDTAE AKAYQDELSA ILGEKLSAED EEEILAEFDN LESLLIVEDM PEVPTTELMP 180
  181 EEPEKMDLPD VPTKAPVASN ETTSTKRKVL EEPLEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..216] PSI-BLAST 18.69897 No description for 2gd5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle