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Protein Overview: DOF43_ARATH

General Information:
Name(s) found: DOF43_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T10646 hypothetical protein T13K14.200 - Arabidopsis thaliana [NCBI NR]
  • gi|7268901|emb|CAB79104.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|55584003|sp|Q9SUB0.1|DOF43_ARATH RecName: Full=Dof zinc finger protein DOF4.3; Short=AtDOF4.3 [NCBI NR]
  • gi|5262794|emb|CAB45899.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|225898791|dbj|BAH30526.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15233483|ref|NP_193836.1| Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3 PE=3 SV=1 [Swiss-Prot]
  • (Q9SUB0) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|5262794|emb|CAB45899.1| putative protein [Arabidopsis thaliana]gi|7486976|pir||T10646 hypothetical protein T13K14.200 - Arabidopsis thalianagi|15233483|ref|NP_193836.1| Dof-type zinc finger domain-containing pr [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Hypothetical Dof zinc finger protein DOF4.3 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | Dof-type zinc finger domain-containing protein | chr4:11234818-11235516 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Hypothetical Dof zinc finger protein DOF4.3 (AtDOF4.3) [nr-271106-contam.fasta]
  • | Symbols: | Dof-type zinc finger domain-containing protein | chr4:11234807-11235505 REVERSE LENGTH=232 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 232 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of transcription [TAS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNFNVVANE DNQVNDVKPP PPPPRVCARC DSDNTKFCYY NNYSEFQPRY FCKNCRRYWT  60
   61 HGGALRNVPI GGSSRAKRTR INQPSVAQMV SVGIQPGSHK PFFNVQENND FVGSFGASSS 120
  121 SFVAAVGNRF SSLSHIHGGM VTNVHPTQTF RPNHRLAFHN GSFEQDYYDV GSDNLLVNQQ 180
  181 VGGYVDNHNG YHMNQVDQYN WNQSFNNAMN MNYNNASTSG RMHPSHLEKG GP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] FFAS03 1.04 Eea1; Eea1 homodimerisation domain
    2 View Details [123..232] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle