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Protein Overview: gi|6735287, gi|1...

General Information:
Name(s) found: gi|6735287 [NCBI NR]
gi|15228461 [NCBI NR]
gi|11358245 [NCBI NR]
Description(s) found:
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  • gi|6735287|emb|CAB68115.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15228461|ref|NP_189800.1| nucleic acid binding / zinc ion binding [Arabidopsis thaliana] [NCBI NR]
  • pir||T46108 hypothetical protein T27B3.10 - Arabidopsis thaliana [NCBI NR]
  • (Q9M2N8) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11358245|pir||T46108 hypothetical protein T27B3.10 - Arabidopsis thalianagi|15228461|ref|NP_189800.1| hypothetical protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | nucleic acid binding / zinc ion binding | chr3:14313046-14314004 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | zinc ion binding;nucleic acid binding | chr3:14302060-14303018 REVERSE LENGTH=273 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein T27B3.10 OS=Arabidopsis thaliana GN=T27B3.10 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: nucleic acid binding [IEA]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNLQRQMQ EIALGVQEEA INLLIELCDE ALRKPNLASL QNRCPKNVDE EVVGRILEIH  60
   61 KIEFLFQSEE SMFSILRRGP WSFNDWMCVI QRWTKLHSDA EFKRIPFWIQ IRGIPLRFLT 120
  121 ARIITSIGER MGLFLETNLG RDVSVLKFQY EKLKNFCTTC GMLSHDASEC PTSGNQGPHA 180
  181 DDDDDDDDND ANEDHPDVPG DNPDQVHGPM NQQHPEESTE DEHQNAPKRG KLKPLLQRLT 240
  241 MEVPWCVATC ARPMPQKILN TAWLKDREGN HKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] MSA 14.126997 View MSA. No confident structure predictions are available.
    2 View Details [142..273] FFAS03 1.0 Solution Structure of the Zinc-finger domain in LIN-28


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle