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Protein Overview: gi|20258919, gi|...

General Information:
Name(s) found: gi|9759100 [NCBI NR]
gi|20258919 [NCBI NR]
gi|15810415 [NCBI NR]
gi|15239227 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|9759100|dbj|BAB09669.1| DnaJ-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20258919|gb|AAM14153.1| putative DnaJ protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15810415|gb|AAL07095.1| putative DnaJ protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15239227|ref|NP_196194.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 294 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGNKDDALK CLKIGKDAIE AGDRSRALKF LEKARRLDPN LPIDGLVSDL KKQSDEPAAE  60
   61 EDSPGSAANE SSKPSDRPSL RQRGSSSSAA GSSSSSSSTE EQRTIVREIK SKKDYYEILG 120
  121 LKSNCSVEDL RKSYRKLSLK VHPDKNKAPG SEEAFKSVSK AFQCLSNEDT RRKYDGSGSD 180
  181 EPAYQPRRDA RRNNGFNGFY DDEFDADEIF RSFFGGGEMN PATTQFRSFN FGGGTRTANQ 240
  241 ASDTGFNPRV LLQILPVVFI LLLNFLPSPQ PIYSLSHRIT TSSNSPRIGA SLTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] PSI-BLAST 3.30103 Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form)
    2 View Details [157..216] PSI-BLAST 23.0 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    3 View Details [217..294] PSI-BLAST 11.522879 The crystal structure of Hsp40 Ydj1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.351522280862744 bayes_pls_golite062009
  • protein binding
    		•  0.145905821189189 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.47

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle