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Protein Overview: gi|4835239, gi|2...

General Information:
Name(s) found: gi|7484927 [NCBI NR]
gi|4835239 [NCBI NR]
gi|28950831 [NCBI NR]
gi|26453173 [NCBI NR]
gi|15230333 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • pir||T08409 DNA-3-methyladenine glycosidase I homolog F18B3.160 - Arabidopsis thaliana [NCBI NR]
  • gi|4835239|emb|CAB42917.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana] [NCBI NR]
  • gi|28950831|gb|AAO63339.1| At3g50880 [Arabidopsis thaliana] [NCBI NR]
  • gi|26453173|dbj|BAC43662.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana] [NCBI NR]
  • gi|15230333|ref|NP_190657.1| HhH-GPD base excision DNA repair family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: DNA repair [IEA]
    base-excision repair [IEA][ISS]
    Molecular Function: catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRKTLTAV NQSSLPPDSL ISAGNLTVSE VSGSSSRIRF RPRKIRKVSS DPSPRIIITA  60
   61 SPPLSTKSTV DIALRHLQSS DELLGALITT HNDPPLFDSS NTPFLSLARS ILYQQLATKA 120
  121 AKCIYDRFIS LFNGGEAGVV PESVISLSAV DLRKIGVSGR KASYLHDLAD KYNNGVLSDE 180
  181 LILKMSDEEL IDRLTLVKGI GVWTVHMFMI FSLHRPDVLP VGDLGVRKGV KDLYGLKNLP 240
  241 GPLQMEQLCE KWRPYRSVGS WYMWRLIESR KTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..273] PSI-BLAST 35.045757 No description for 2h56A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.66

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle