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Protein Overview: ECI3_ARATH

General Information:
Name(s) found: ECI3_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||E71406 probable carnitine racemase - Arabidopsis thaliana [NCBI NR]
  • gi|7268150|emb|CAB78486.1| carnitine racemase like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30023700|gb|AAP13383.1| At4g14440 [Arabidopsis thaliana] [NCBI NR]
  • gi|2244800|emb|CAB10223.1| carnitine racemase like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18252927|gb|AAL62390.1| carnitine racemase like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15236499|ref|NP_193180.1| HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1); carnitine racemase/ catalytic/ dodecenoyl-CoA delta-isomerase [Arabidopsis thaliana] [NCBI NR]
  • Enoyl-CoA delta isomerase 3 OS=Arabidopsis thaliana GN=ECI3 PE=1 SV=1 [Swiss-Prot]
  • (O23300) Carnitine racemase like protein (At4g14440) [athaliana3702.FASTAC.txt]
  • At4g14440 [Arabidopsis thaliana]gi|7268150|emb|CAB78486.1| carnitine racemase like protein [Arabidopsis thaliana]gi|2244800|emb|CAB10223.1| carnitine racemase like protein [Arabidopsis thaliana]gi|18252927|gb|AAL62390.1| carnitine racemase like protein [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Enoyl-CoA hydratase/isomerase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | enoyl-CoA hydratase/isomerase family protein | chr4:8306942-8307658 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • carnitine racemase like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • carnitine racemase/ catalytic [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g14440 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATECI3, ECI3, HCD1 | 3-hydroxyacyl-CoA dehydratase 1 | chr4:8306946-8307662 REVERSE LENGTH=238 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 3-hydroxyacyl-CoA dehydratase 1 OS=Arabidopsis thaliana GN=dl3260c PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 238 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    [NOT]peroxisome [IDA]
    cytosol [IDA]
    Biological Process: fatty acid catabolic process [IMP]
    metabolic process [ISS]
    Molecular Function: carnitine racemase activity [ISS]
    catalytic activity [ISS]
    dodecenoyl-CoA delta-isomerase activity [IDA][IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCTLEKRGDL FLLTLTGEDE HRFHPDTIAS VLSLLEQAKS QSTKGSVLIT TGHGKFFSNG  60
   61 FDLAWAQSAG HGAIKRMHQM VKSFKPVLAA LLDLPMPTIA ALNGHAAASG LMFALSHDYV 120
  121 FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD 180
  181 SAAHDSAEGV VEATVSLGES LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..238] PSI-BLAST 53.0 No description for 2iexA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.52

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle