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Protein Overview: RL212_ARATH

General Information:
Name(s) found: RL212_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75170010|sp|Q9FDZ9.1|RL212_ARATH RecName: Full=60S ribosomal protein L21-2 [NCBI NR]
  • gi|28466903|gb|AAO44060.1| At1g57860 [Arabidopsis thaliana] [NCBI NR]
  • pir||H96610 probable 60S ribosomal protein L21 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21555617|gb|AAM63899.1| 60S ribosomal protein L21, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|20258869|gb|AAM14106.1| putative 60S ribosomal protein L21 [Arabidopsis thaliana] [NCBI NR]
  • gi|18406104|ref|NP_564726.1| 60S ribosomal protein L21 [Arabidopsis thaliana] [NCBI NR]
  • gi|18406015|ref|NP_564724.1| 60S ribosomal protein L21 (RPL21E) [Arabidopsis thaliana] [NCBI NR]
  • gi|15292813|gb|AAK92775.1| putative 60S ribosomal protein L21 [Arabidopsis thaliana] [NCBI NR]
  • gi|12321346|gb|AAG50742.1|AC079733_10 60S ribosomal protein L21, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|11079525|gb|AAG29235.1|AC079732_6 60S ribosomal protein L21, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|110735696|dbj|BAE99828.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • 60S ribosomal protein L21-2 OS=Arabidopsis thaliana GN=RPL21E PE=2 SV=1 [Swiss-Prot]
  • (Q9FDZ9) Putative ribosomal protein L21 (Putative 60S ribosomal protein L21) (60S ribosomal protein L21, putative) (At1g57860) [athaliana3702.FASTAC.txt]
  • 60S ribosomal protein L21, putative [Arabidopsis thaliana]gi|21555617|gb|AAM63899.1| 60S ribosomal protein L21, putative [Arabidopsis thaliana]gi|20258869|gb|AAM14106.1| putative 60S ribosomal protein L21 [Arabidopsis thaliana]gi|15292813|gb|AAK92775.1 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 60S ribosomal protein L21 (RPL21E) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 60S ribosomal protein L21 (RPL21E) | chr1:21359232-21360029 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: | 60S ribosomal protein L21 | chr1:21433699-21434492 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative 60S ribosomal protein L21 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein L21, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g57860 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein L21-2 [nr-271106-contam.fasta]
  • | Symbols: | Translation protein SH3-like family protein | chr1:21355567-21356364 FORWARD LENGTH=164 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • | Symbols: | Translation protein SH3-like family protein | chr1:21430034-21430827 REVERSE LENGTH=164 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 164 amino acids

    Gene Ontology:
    Cellular Component: cytosolic large ribosomal subunit [IDA]
    ribosome [IEA][ISS]
    intracellular [IEA]
    Biological Process: translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAGHGVRAR TRDLFARPFR KKGYIPLSTY LRTFKVGDYV DVKVNGAIHK GMPHKFYHGR  60
   61 TGRIWNVTKR AVGVEVNKQI GNRIIRKRIH VRVEHVQQSR CAEEFKLRKK QNDVLKADAK 120
  121 ARGETISTKR QPKGPKPGFM VEGMTLETVT PIPYDVVNDL KGGY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] PSI-BLAST 37.522879 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle