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Protein Overview: TIF6B_ARATH

General Information:
Name(s) found: TIF6B_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 352 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: jasmonic acid mediated signaling pathway [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERDFLGLGS KNSPITVKEE TSESSRDSAP NRGMNWSFSN KVSASSSQFL SFRPTQEDRH  60
   61 RKSGNYHLPH SGSFMPSSVA DVYDSTRKAP YSSVQGVRMF PNSNQHEETN AVSMSMPGFQ 120
  121 SHHYAPGGRS FMNNNNNSQP LVGVPIMAPP ISILPPPGSI VGTTDIRSSS KPIGSPAQLT 180
  181 IFYAGSVCVY DDISPEKAKA IMLLAGNGSS MPQVFSPPQT HQQVVHHTRA SVDSSAMPPS 240
  241 FMPTISYLSP EAGSSTNGLG ATKATRGLTS TYHNNQANGS NINCPVPVSC STNVMAPTVA 300
  301 LPLARKASLA RFLEKRKERV TSVSPYCLDK KSSTDCRRSM SECISSSLSS AT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] MSA 1.027996 View MSA. No confident structure predictions are available.
    2 View Details [141..266] MSA 7.046995 View MSA. No confident structure predictions are available.
    3 View Details [267..352] MSA 1.038995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle