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Protein Overview: gi|18417264, gi|...

General Information:
Name(s) found: gi|30023658 [NCBI NR]
gi|20466338 [NCBI NR]
gi|18417264 [NCBI NR]
gi|10177666 [NCBI NR]
Description(s) found:
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  • gi|30023658|gb|AAP13362.1| At5g14000 [Arabidopsis thaliana] [NCBI NR]
  • gi|20466338|gb|AAM20486.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18417264|ref|NP_568292.1| anac084 (Arabidopsis NAC domain containing protein 84); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|10177666|dbj|BAB11128.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • (Q9FFX5) Genomic DNA, chromosome 5, P1 clone:MAC12 (Hypothetical protein) (At5g14000) [athaliana3702.FASTAC.txt]
  • At5g14000 [Arabidopsis thaliana]gi|10177666|dbj|BAB11128.1| unnamed protein product [Arabidopsis thaliana]gi|20466338|gb|AAM20486.1| unknown protein [Arabidopsis thaliana]gi|18417264|ref|NP_568292.1| no apical meristem (NAM) family protein [Arabidopsis [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 No apical meristem (NAM) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ANAC084 | ANAC084 (Arabidopsis NAC domain containing protein 84); transcription factor | chr5:4518179-4519036 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At5g14000 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ANAC084; transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: anac084, NAC084 | NAC domain containing protein 84 | chr5:4518177-4519034 FORWARD LENGTH=206 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g14000 OS=Arabidopsis thaliana GN=NAC084 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 206 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: multicellular organismal development [ISS]
    regulation of transcription [IEA]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVEKRIVVN GGMKLPIGYR FHPTEQELIL HYLLPKAFAS PLPSSIIPVF DLFFSHPLSF  60
   61 PGDQKEKQRY FFCKKREVSS NEHRIKISSG DGYWKPIGKE RPIIACGKTF GIRRTLAFYE 120
  121 TNKSSSYCNK TRWSMTEYCL AGFASAKVSG EWAVYNVYER KGSKGRKQRK SREGDDEELR 180
  181 CIDHFTVGSN HETGPPPPSP PTSADE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] PSI-BLAST 63.522879 Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle