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Protein Overview: gi|25349338, gi|...

General Information:
Name(s) found: gi|3894186 [NCBI NR]
gi|30023764 [NCBI NR]
gi|25349338 [NCBI NR]
gi|18252865 [NCBI NR]
gi|15227331 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|3894186|gb|AAC78535.1| putative embryo-abundant protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30023764|gb|AAP13415.1| At2g41380 [Arabidopsis thaliana] [NCBI NR]
  • pir||A84841 probable embryo-abundant protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18252865|gb|AAL62359.1| putative embryo-abundant protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15227331|ref|NP_181669.1| embryo-abundant protein-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 269 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: response to cadmium ion [IEP]
    Molecular Function: methyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKLFIKQAE QYAAARPSYP TKLFEYIASK TPCHDLAWDV GAGSGQASRS LAGIYKNVIA  60
   61 TDTSSKQLEF AAKLPNVRYE ITPPTMSSSE IEKLVAPESS VDLVTVAQAL HWFDLTNFYS 120
  121 NVKHVLKKPN GVIAAWCYTN PEVNDAVDKV FQRFYDEKLG PHWDLARRLV EDGYRGIEFP 180
  181 FEKVDNDEST ESQSFPVRFV TEKEMVFEEY MTYLRSSSAY QTAKEKGLEL LTAEMEGEFA 240
  241 GSWKEDGKEK KVVRYPIYLL IGRVAEERV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] PSI-BLAST 22.221849 Crystal structure of Ubiquinone/menaquinone biosynthesis methyltransferase-related protein (tm1389) from THERMOTOGA MARITIMA at 2.35 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity
    		•  0.569065423404044 bayes_pls_golite062009
  • catalytic activity
    		•  0.486907672100804 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.155495931533276 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.145822362574272 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle