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Protein Overview: gi|30102886, gi|...

General Information:
Name(s) found: gi|7487708 [NCBI NR]
gi|7271043 [NCBI NR]
gi|4490739 [NCBI NR]
gi|30102886 [NCBI NR]
gi|20260582 [NCBI NR]
gi|15236061 [NCBI NR]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • pir||T06094 hypothetical protein T5J17.50 - Arabidopsis thaliana [NCBI NR]
  • gi|7271043|emb|CAB80651.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4490739|emb|CAB38901.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30102886|gb|AAP21361.1| At4g39880 [Arabidopsis thaliana] [NCBI NR]
  • gi|20260582|gb|AAM13189.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15236061|ref|NP_195698.1| ribosomal protein L23 family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 178 amino acids

    Gene Ontology:
    Cellular Component: ribosome [ISS]
    Biological Process: ribosome biogenesis [ISS]
    translation [ISS]
    Molecular Function: nucleotide binding [IEA]
    structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSRLGGRVV HFANLPIKLL MPAKLTNIHE FALKTIPSAS KIEIKRVLES LYGFDVEKVN  60
   61 TLNMDGKKKK RGGLLIAKAD YKKAYVTLRS PLSISRDLFP VKYIEEDRKS KVKGSSFVEE 120
  121 EDDKKSHWLD RKEKREIGGY GKGKGRRGGE RANSPTRGGA AAAGTAKFPW SNMRFVGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] PSI-BLAST 26.69897 50S subunit
    2 View Details [102..178] PSI-BLAST 32.09691 No description for 2h32H was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural molecule activity
    		•  0.15106060672069 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.14216277359866 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle