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Protein Overview: gi|12322576, gi|...

General Information:
Name(s) found: gi|30692851 [NCBI NR]
gi|29824307 [NCBI NR]
gi|26450075 [NCBI NR]
gi|12322576 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|30692851|ref|NP_174601.2| peptide chain release factor, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|29824307|gb|AAP04114.1| putative peptide chain release factor [Arabidopsis thaliana] [NCBI NR]
  • gi|26450075|dbj|BAC42157.1| putative peptide chain release factor [Arabidopsis thaliana] [NCBI NR]
  • gi|12322576|gb|AAG51290.1|AC027035_13 unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 257 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: translational termination [IEA][ISS]
    Molecular Function: translation release factor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIMAVAALF HARFPLLLRR SIPLLSAPTS VIYNHRTLLS DGLSTRLCSI LRYSSSDGVN  60
   61 GGSSGGDFGN DNDSVSVVSD VQSPNYLKFT DEELMKQCRL ETFRVSGPGG QHRNKRDSAV 120
  121 RLKHLPTGIV AQAVEDRSQH KNRASALNRL RTLLAIKVRN KVDIEAYAPP PELLQILPPK 180
  181 STIRTSSGSQ IGPNNPKFVP GMQALLDVIS ASDGSIADSA KLLGLSTGGL SRLILSHDGL 240
  241 RMAVNSMRAA KGIKPLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..257] PSI-BLAST 82.69897 Molecular basis for bacterial class 1 release factor methylation by PrmC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.72500611461832 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.33510710518321 bayes_pls_golite062009
  • translation regulator activity
    		•  1.23360033083197 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  1.23313210840115 bayes_pls_golite062009
  • translation termination factor activity
    		•  1.224889505882 bayes_pls_golite062009
  • translation release factor activity
    		•  1.22486339070595 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.53

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle