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Protein Overview: gi|20198007, gi|...

General Information:
Name(s) found: gi|28059060 [NCBI NR]
gi|20198007 [NCBI NR]
gi|18399807 [NCBI NR]
gi|16648991 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|28059060|gb|AAO29983.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20198007|gb|AAD20402.2| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18399807|ref|NP_565519.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16648991|gb|AAL24347.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 569 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKLEHFSHS CPLTSPEIVA EGICNICFQD QVVEYACKPC NFDICKTCSK LPQKVSHGFH  60
   61 SDHPLEFSLF QYDRKPGYIV CSCCGNMSSC SFYECKECEI YLDLGCALLK NVFTGWDVRE 120
  121 MLHYSHEHLL RRCKPGQDAR GSCLLCELPL SPSSICYGCV YCYSFLHERC LDLPTEIRHP 180
  181 VHLEHPLRRL DYIRSGGRTF CGACREKIDS VPFGCLECGF YIHMRCADSF LRCLMHESHE 240
  241 HKLFYVSSNA KEHFGRNNCC QICLGAVVSS LDSYYHCIEC ELEFHFECLG ISKTISKRSC 300
  301 HIHPLVCKRV REEDDSLEYC GVCETLIHAG HHVYSCEECD FLGHIECILR EKEPSPLYLK 360
  361 DLYSCVEDVK RATNQEDYET NKVMVHDINH NHVVTSIDMC ELEGKEHCHI CEKEILGNPW 420
  421 KCETCNFVTH NFCVELGKPS RHRFHWNHLL TLMPKPVATD MTSCKSCRED IKGFNLFCRI 480
  481 CNFIIHVSCA MKGKRFLGMT GPKVVGTWRG RCLGGKHRMV QVMFPRSYQK VCIICHERVL 540
  541 GKAVSCMECE TIYHLRCIDR HRIKDRDSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] FFAS03 2.26 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    2 View Details [120..299] MSA 12.236997 View MSA. No confident structure predictions are available.
    3 View Details [300..377] PSI-BLAST 3.39794 NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE
    4 View Details [378..569] PSI-BLAST 3.69897 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0196698141692984 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
    4
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle