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Protein Overview: gi|238479754, gi...

General Information:
Name(s) found: gi|79313211 [NCBI NR]
gi|28827476 [NCBI NR]
gi|28393338 [NCBI NR]
gi|238479754 [NCBI NR]
gi|222424407 [NCBI NR]
gi|15795135 [NCBI NR]
gi|15230674 [NCBI NR]
Description(s) found:
Found 16 descriptions.
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  • gi|79313211|ref|NP_001030685.1| hAT dimerisation domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28827476|gb|AAO50582.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28393338|gb|AAO42094.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|238479754|ref|NP_001154612.1| hAT dimerisation domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|222424407|dbj|BAH20159.1| AT3G13030 [Arabidopsis thaliana] [NCBI NR]
  • gi|15795135|dbj|BAB02513.1| transposase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15230674|ref|NP_187909.1| hAT dimerisation domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 544 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: protein dimerization activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMEERSCHT ANRVGDVQMG NGHKRGRSED SSSNNVSIGV ETDKQDMLSN KAQKKWVFGK  60
   61 CVNLSAVDAP CFKEMMTVDG GQMGLESSDC HDLNGWRLQD ALEEVQDRVE KIKESWAITG 120
  121 CSILLDAWVD QKGRDLVTFV ADCPAGLVYL ISFDVSDFKD DVTALLSLVN GLVEEVGVRN 180
  181 VTQIIACSTS GWVGELGELF AGHDREVFWS VSVSHCFELM LVKISKIRSF GDIFDKVNNI 240
  241 WLFINNNPSV LNIFRDQCHG IDITVSSSEF EFVTPYLILE SIFKAKKNLT AMFASSNWNN 300
  301 EQCIAISNLV SDSSFWETVE SVLKCTSPLI HGLLLFSTAN NQHLGYVYDT MDSIKESIAR 360
  361 EFNHKPQFYK PLWDVIDDVW NKHLHNPLHA AGYFLNPTAF YSTNFHLDIE VVTGLISSLI 420
  421 HMVEDCHVQF KISTQIDMYR LGKDCFNEAS QADQITGISP AEWWAHKASQ YPELQSLAIK 480
  481 ILSQTCEGAS KYKLKRSLAE KLLLSEGMSN RERQHLDELV FVQYNLHLQS YKAKLSEEID 540
  541 VYKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..544] PSI-BLAST 48.69897 Three-dimensional structure of the Hermes DNA transposase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle