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Protein Overview: RTL1_ARATH

General Information:
Name(s) found: RTL1_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Ribonuclease 3-like protein 1 OS=Arabidopsis thaliana GN=RTL1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 198 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: RNA binding [IEA]
    double-stranded RNA binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDQETKRIT KKPSRSIIIS LKDIPPLDPS SIPSMKPMAQ DHHNVGMQRF QEKTDFKFEE  60
   61 EDNAISSFSN IQIDPNSTRS ISLEKKLAPK PDEEHTTTTK PISKDDESKT RRGSAKSVLH 120
  121 EMCASKRWRP PVYECCNVDG PCHLRLFTYK VMVEIRDSSG KTVLECFGDP RRKKKAAAEH 180
  181 AAEGALWYLE HVKTKPHQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] PSI-BLAST 6.0 dsRNA-dependent protein kinase pkr

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.602312874472495 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle