YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|18402081, gi|...

General Information:
Name(s) found: gi|9280318 [NCBI NR]
gi|27754245 [NCBI NR]
gi|18402081 [NCBI NR]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • gi|9280318|dbj|BAB01697.1| oxidase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|27754245|gb|AAO22576.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18402081|ref|NP_566624.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 349 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: flavonoid biosynthetic process [ISS]
    Molecular Function: iron ion binding [IEA]
    oxidoreductase activity [IEA]
    flavonol synthase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDLDPTYIQ APEHRSDSNF IPNQPEEIPV IDLSRLDDPE DVQNVISEIG DACEKWGFFQ  60
   61 VLNHGVPSDA RQRVEKTVKM FFDLPMEEKI KVKRDDVNPV GYHDGEHTKN VKDWKEVFDI 120
  121 YFKDPMVIPS TTDPEDEGLR LVYNKWPQSP SDFREACEVY ARHAEKLAFK LLELISLSLG 180
  181 LPKERFHDYF KEQMSFFRIN RYPPCPRPDL ALGVGHHKDA DVISLLAQDD VGGLQVSRRS 240
  241 DGVWFPIRPV PNALVINIGN CMEIWTNDKY WSAEHRVVVN TTRERYSIPF FLLPSHDVEV 300
  301 KPLEELVSPE NPPKYKGYKW GKFYVSRNRS DFRKLEIENI QIDDFKVKT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..349] PSI-BLAST 76.522879 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
    		•  2.13037944896112 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
    		•  1.96457406152694 bayes_pls_golite062009
  • binding
    		•  1.78258647804494 bayes_pls_golite062009
  • catalytic activity
    		•  0.921320409505 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.778311364997835 bayes_pls_golite062009
  • DNA binding
    		•  0.705906158188305 bayes_pls_golite062009
  • protein binding
    		•  0.200706152890822 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle