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Protein Overview: SGS3_ARATH

General Information:
Name(s) found: SGS3_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Protein SUPPRESSOR OF GENE SILENCING 3 OS=Arabidopsis thaliana GN=SGS3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 625 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: virus induced gene silencing [IMP]
    vegetative phase change [IMP]
    defense response to virus [IMP]
    production of ta-siRNAs involved in RNA interference [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRAGPMSK EKNVQGGYRP EVEQLVQGLA GTRLASSQDD GGEWEVISKK NKNKPGNTSG  60
   61 KTWVSQNSNP PRAWGGQQQG RGSNVSGRGN NVSGRGNGNG RGIQANISGR GRALSRKYDN 120
  121 NFVAPPPVSR PPLEGGWNWQ ARGGSAQHTA VQEFPDVEDD VDNASEEEND SDALDDSDDD 180
  181 LASDDYDSDV SQKSHGSRKQ NKWFKKFFGS LDSLSIEQIN EPQRQWHCPA CQNGPGAIDW 240
  241 YNLHPLLAHA RTKGARRVKL HRELAEVLEK DLQMRGASVI PCGEIYGQWK GLGEDEKDYE 300
  301 IVWPPMVIIM NTRLDKDDND KWLGMGNQEL LEYFDKYEAL RARHSYGPQG HRGMSVLMFE 360
  361 SSATGYLEAE RLHRELAEMG LDRIAWGQKR SMFSGGVRQL YGFLATKQDL DIFNQHSQGK 420
  421 TRLKFELKSY QEMVVKELRQ ISEDNQQLNY FKNKLSKQNK HAKVLEESLE IMSEKLRRTA 480
  481 EDNRIVRQRT KMQHEQNREE MDAHDRFFMD SIKQIHERRD AKEENFEMLQ QQERAKVVGQ 540
  541 QQQNINPSSN DDCRKRAEEV SSFIEFQEKE MEEFVEEREM LIKDQEKKME DMKKRHHEEI 600
  601 FDLEKEFDEA LEQLMYKHGL HNEDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] deduced N/A No confident structure predictions are available.
    2 View Details [146..272] PSI-BLAST 4.69897 No description for 2fxmA was found.
    3 View Details [273..625] PSI-BLAST 24.221849 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle