YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: NEN3_ARATH

General Information:
Name(s) found: NEN3_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • pir||F96772 probable exonuclease F1M20.7 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|23198160|gb|AAN15607.1| putative exonuclease [Arabidopsis thaliana] [NCBI NR]
  • gi|20466502|gb|AAM20568.1| putative exonuclease [Arabidopsis thaliana] [NCBI NR]
  • gi|15221225|ref|NP_177579.1| exonuclease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12324816|gb|AAG52378.1|AC011765_30 putative exonuclease; 20146-18080 [Arabidopsis thaliana] [NCBI NR]
  • Protein NEN3 OS=Arabidopsis thaliana GN=NEN3 PE=2 SV=1 [Swiss-Prot]
  • (Q9CA74) Putative exonuclease [athaliana3702.FASTAC.txt]
  • putative exonuclease [Arabidopsis thaliana]gi|20466502|gb|AAM20568.1| putative exonuclease [Arabidopsis thaliana]gi|25406343|pir||F96772 probable exonuclease F1M20.7 [imported] - Arabidopsis thalianagi|12324816|gb|AAG52378.1| putative exonuclease; 2014 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Exonuclease family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | exonuclease family protein | chr1:27965421-27967487 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative exonuclease [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative exonuclease; 20146-18080 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • exonuclease [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr1:27961760-27963826 REVERSE LENGTH=506 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Polynucleotidyl transferase, ribonuclease H-like protein OS=Arabidopsis thaliana GN=F1M20.7 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 506 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA][ISS]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    exonuclease activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSLGGDER SEIAFFDLET AVPTKSGEPF AILEFGAILV CPRRLEELYS YSTLVRPTDL  60
   61 SLISTLTKRR SGITRDGVLS AHTFSEIADK VYDILHGRIW AGHNIIRFDC VRIREAFAEI 120
  121 GLSPPEPKAT IDSLSLLSQK FGKRAGDMKM ASLATYFGLG DQAHRSLDDV RMNLEVVKYC 180
  181 ATVLFLESSV PDILTDMSWF SPRKSPRTRS NGKLVANGVR ESSTSSSSSP KTDPSSSSVD 240
  241 ATIVKNHPIV SLLTECSESD ASSYDIEDPI DITTLIGKLR IGTLQTDAAE EAKTVRQQDE 300
  301 SPPSPDSDAK DESFLGVNEV SVSSIRASLV PFYRGSLRMK LFHNDTPLHL CWHSLKVRFG 360
  361 ISRKFVDHAG RPKLNIIVDA PLDLCKILDA VDAAAHNLPT DSSTNSDWRP TVIRKEGFAN 420
  421 YPTARLHISS ESNGDDTLCG TQVYQKEEPL GTNQKLDVSS DNLEKLESAL LPGTLVDAFF 480
  481 SLEPYSYQQM AGIRLAVKKL VILLKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..421] PSI-BLAST 47.30103 Exonuclease I
    2 View Details [422..506] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle