YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PAP9_ARATH

General Information:
Name(s) found: PAP9_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|75183080|sp|Q9M2P7.1|PAP9_ARATH RecName: Full=Probable plastid-lipid-associated protein 9, chloroplastic; AltName: Full=Fibrillin-9; Short=AtPGL34; Flags: Precursor [NCBI NR]
  • gi|6729544|emb|CAB67629.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|24899829|gb|AAN65129.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22135958|gb|AAM91561.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21554063|gb|AAM63144.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|15230933|ref|NP_191360.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T46023 hypothetical protein T10K17.220 - Arabidopsis thaliana [NCBI NR]
  • Probable plastid-lipid-associated protein 9, chloroplastic OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1 [Swiss-Prot]
  • (Q9M2P7) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown [Arabidopsis thaliana]gi|22135958|gb|AAM91561.1| putative protein [Arabidopsis thaliana]gi|6729544|emb|CAB67629.1| putative protein [Arabidopsis thaliana]gi|11357956|pir||T46023 hypothetical protein T10K17.220 - Arabidopsis thalianagi|15230933 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | Identical to Probable plastid-lipid-associated protein 9, chloroplast precursor (PAP9) [Arabidopsis Thaliana] (GB:Q9M2P7); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42130.4); similar to unknown [Populus trichocarpa] (GB:AB [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Identical to Probable plastid-lipid-associated protein 9, chloroplast precursor (PAP9) [Arabidopsis Thaliana] (GB:Q9M2P7); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42130.4); similar to unknown [Populus trichocarpa] (GB:ABK96151.1) | chr3:21486926-21488440 REVERSE [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: PGL34 | plastoglobulin 34kD | chr3:21475949-21477463 REVERSE LENGTH=308 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Probable plastid-lipid-associated protein 9, chloroplastic OS=Arabidopsis thaliana GN=PAP9 PE=1 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 308 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    thylakoid lumen [IDA]
    plastoglobule [IDA]
    thylakoid [IDA]
    chloroplast thylakoid membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALIQHGSVS GTSAVRLSFS SSVSPPSSSP PLSRVSLNFQ SEKKSCYRRM ICRAMVQDSV  60
   61 QGIPSVYARE MERLSAKESL ILAFNDAGGF EALVTGKITD MQKIDVNERI TNLERLNPTP 120
  121 RPTTSPYLEG RWSFEWFGVN TPGSLAVRVM FERFPSTLVS LSNMEIFIKD NNTKATANIK 180
  181 LLNSIENKIT LSSKLTIEGP LRMKEEYLEG LLESPTVIEE AVPDQLRGLL GQATTTLQQL 240
  241 PEPIKDTLAN GLRIPLGGTY QRFFMISYLD DEILIVRDTA GVPEVLTRVE TSSPMSSSSV 300
  301 VENLEYNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] deduced N/A No confident structure predictions are available.
    2 View Details [155..308] MSA 3.075984 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle