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Protein Overview: JAL34_ARATH

General Information:
Name(s) found: JAL34_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Jacalin-related lectin 34 OS=Arabidopsis thaliana GN=JAL34 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 705 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    membrane [IDA]
    cytosol [IDA]
    Biological Process: response to cold [IEP]
    Molecular Function: copper ion binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWDDGSHAK VKKVQLTFDE IIYSIQVTYD GATALQSQLR GSVGPKSAEF TLAPDEYITA  60
   61 LSAYGKSLST QEVITALTFT TNKTSYGPYG TKSGFQISAP EATGKQISGF LGTSGNVLNT 120
  121 IDVHYSPIPT GGTGTGGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGGTG TGTGTGTGGT 180
  181 GTGTGTGGTG TGTGTGTGTG TGTGTGTGTG TGGTGTGTGT GGTGTGTGTG TGTGTGTGGT 240
  241 GTGTGTGTGS GAQKLEAQGN STGGTSWDDG SDYDGVTKIY ASYGGEGIQY VKFDYVKGGV 300
  301 TKQGVLHGKQ QSRQNPREFV INHPDEYLVS VEGWYETVML GIQFKTNLNT YEVSIYPFEP 360
  361 STDTKFTLQV QDKKIIGFHG FAGNHVNSIG AYFVPKSSTT PVPSTPLKLT AEGGETGAVW 420
  421 DDGSHDDVKK VYVGQGQDGV AAVKFEYKNG SQVVFGDERG TRTLLGFEEF ELESDEYITS 480
  481 VEGYYEKNFG VDTVVTTLIF KTSKNKTAGP FGIVSGTKFE FKKEGYKITG FHGRAGEYVN 540
  541 AIGAYLAPSG TTPLTPATQS QKLEGAGSEA GTLWDDGAFD GVRKVSVGQA QDGIGAVSFV 600
  601 YDKAGQVVEG KEHGKPTLLG FEEFELDYPS EYITAVDGTY DAIFGNEPIV NMLRFTTNKR 660
  661 VSIPFGIGAG TAFEFKKDGQ KIVGFHGRAG DLLHKFGVHV APITK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..256] PSI-BLAST 42.0 No description for 1y0fB was found.
    2 View Details [257..705] PSI-BLAST 73.39794 Crystal structure of the Parkia platycephala seed lectin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle