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Protein Overview: gi|23397281, gi|...

General Information:
Name(s) found: gi|4191794 [NCBI NR]
gi|25411920 [NCBI NR]
gi|25084205 [NCBI NR]
gi|23397281 [NCBI NR]
gi|20466722 [NCBI NR]
gi|15224819 [NCBI NR]
gi|110741542 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|4191794|gb|AAD10163.1| putative Ta11-like non-LTR retroelement protein [Arabidopsis thaliana] [NCBI NR]
  • pir||D84579 probable Ta11-like non-LTR retroelement protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|25084205|gb|AAN72195.1| putative Ta11-like non-LTR retroelement protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23397281|gb|AAN31922.1| putative Ta11-like non-LTR retroelement protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20466722|gb|AAM20678.1| putative Ta11-like non-LTR retroelement protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15224819|ref|NP_179555.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110741542|dbj|BAE98720.1| putative Ta11-like non-LTR retroelement protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 682 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENFLALFNE GMDEEASRLE KLLPFHEHPL IPFTRFEFTK CKGCYSTDED NTSFISKHPG  60
   61 CSYIYGGHRC NEPGCDVVFH EECAKPLPEI DHPYHPVHPL KLILLHTRVS NCSFCGEFFS 120
  121 VGYRCNKCDF QLDLICARRP ALLVLAENSY LHEHPLQLSH EAHETLRDCK GCGHQHNSWK 180
  181 HFYTCHQCEF FISLDCIDHN SPEAYHTSHP QHPLKSLRYE VPGYADKKCL LCREEFDGIH 240
  241 RQLHHCGVCN FSICRSCMKN PPPVLVKSPR THEHQLHLVP RRIDFTCNAC GTLGDRSPYF 300
  301 CLQCNFMIHR ECIDLPRVIN INRHDHRISY TPRLGHGDGK CRVCRKNVDG FYGAYSCSKC 360
  361 FDYFVHSRCA TRRDVWDMIE LEGTPEEEET APFKVIDDNT IDHYGHKHNL RIYRGWNLPE 420
  421 SVVCTACVFQ ICSEPFYACA RKRCDFIIHE KCAKLPLKKR HVCHNQPLEL SPNYGTYLLH 480
  481 RCSICRQLFT GFSYESKELR IDVRCATVTE PFEHKSHQHP LHYSTDHSKR CSECDGDGKL 540
  541 SCDDCEFGLC FKCAILPQKV MRHRYDDHPL FLSYGEMGVA GKYWCEACET TVNPEKWFYT 600
  601 CNECGITLHI SCVIDTYAYS MPGALTWIGT FVSNHSICRP LCCVCNSRCK LPFVRTLPED 660
  661 GADLYFCSLE CEKKIYQERF EF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] FFAS03 1.37 No description for 2j7aA was found.
    2 View Details [207..313] PSI-BLAST 6.045757 Crystal Structure of the Human Beta2-Chimaerin
    3 View Details [314..553] FFAS03 1.14 No description for 2j7aA was found.
    4 View Details [554..682] PSI-BLAST 4.154902 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle