YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPL9_ARATH

General Information:
Name(s) found: SPL9_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • Squamosa promoter-binding-like protein 9 OS=Arabidopsis thaliana GN=SPL9 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 375 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: leaf development [IDA][IMP]
    vegetative to reproductive phase transition of meristem [IGI]
    regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV  60
   61 RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS KTPKVTVAGI EQRFCQQCSR 120
  121 FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL 180
  181 GNQEIGWPSS RTLDTRVMRR PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY 240
  241 KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH 300
  301 QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN 360
  361 TRAYDSSSHH TNWSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] PSI-BLAST 39.39794 Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 4
    2 View Details [163..375] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle