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Protein Overview: gi|15238760, gi|...

General Information:
Name(s) found: gi|9759189 [NCBI NR]
gi|23296399 [NCBI NR]
gi|20268729 [NCBI NR]
gi|15238760 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|9759189|dbj|BAB09726.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|23296399|gb|AAN13109.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20268729|gb|AAM14068.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15238760|ref|NP_200162.1| WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 654 amino acids

    Gene Ontology:
    Cellular Component: heterotrimeric G-protein complex [ISS]
    Biological Process: signal transduction [ISS]
    Molecular Function: signal transducer activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYLSQEEDL QFFDANEEMM ALNPSGFGFD VWNDSPGSVV ERRRKFLEWM GVEEEGRVET  60
   61 KDSVSGSSVE SCFDGGEENS VEAEERSGEC SSSSSEVSLS GSSVEVSEEL SLRVDRNVGG 120
  121 CDVTRRQSSS MASCSSSRYC QVKETEKQRN IAGLVTSFKK GWLSRLRSMG CTADTNIESG 180
  181 GRMRASSGYG DVISRVKVKH CKKQAKELSA LYQSQDIKAH DGAILAMKFS NDGKFLASSG 240
  241 EDGIVRVWKV VEDKKSRLRR DCLNEIDPSC MYFEVNDLSQ LKPVLVNEEK PKKTTESFRK 300
  301 TSDSACVVFP PKVFRIMEKP LYEFRGHTGE VLDISWSKDN YLLSASMDKT VRLWKVGSND 360
  361 CLGVFAHNSY VTSVQFNPVN ENYFMSGSID GKVRIWNISG CSVVDWADLK DIISAVCYRP 420
  421 DGQGGIIGSL NGSCRFFNMS GEFLELDSQI HLHNKKKSSN KRITGFQFLP QEPTKVLVVS 480
  481 ADSKVRILQG NNVVRKYKGV CKTRSLTSAS LTSDGKHIVS ACEDSNVYIW SNDEESETKK 540
  541 IRSFERFSAN ASVAATWCGF SDHNTTLPFS SPSCLSHNEG FVPGSISKGS ATWPEENLPA 600
  601 NPLSTSAMNA SHYKFLKSSY QRASSSLSWG MVIVTGGWDG QIRTFQNYGL PVTT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] PSI-BLAST 68.09691 PAF-AH Holoenzyme: Lis1/Alfa2
    2 View Details [115..546] PSI-BLAST 9.0 Tricorn protease; Tricorn protease N-terminal domain; Tricorn protease domain 2
    3 View Details [547..654] PSI-BLAST 67.522879 No description for 2gnqA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.074040936650541 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle