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Protein Overview: SERA1_ARATH

General Information:
Name(s) found: SERA1_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T05416 probable phosphoglycerate dehydrogenase (EC 1.1.1.95) - Arabidopsis thaliana [NCBI NR]
  • gi|7270370|emb|CAB80137.1| Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|2911042|emb|CAA17552.1| Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23297595|gb|AAN12903.1| putative phosphoglycerate dehydrogenase [Arabidopsis thaliana] [NCBI NR]
  • gi|17380672|gb|AAL36166.1| putative phosphoglycerate dehydrogenase [Arabidopsis thaliana] [NCBI NR]
  • gi|15235282|ref|NP_195146.1| EDA9 (embryo sac development arrest 9); ATP binding [Arabidopsis thaliana] [NCBI NR]
  • D-3-phosphoglycerate dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=PGDH1 PE=1 SV=1 [Swiss-Prot]
  • (O49485) Phosphoglycerate dehydrogenase-like protein [athaliana3702.FASTAC.txt]
  • putative phosphoglycerate dehydrogenase [Arabidopsis thaliana]gi|17380672|gb|AAL36166.1| putative phosphoglycerate dehydrogenase [Arabidopsis thaliana]gi|7270370|emb|CAB80137.1| Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana]gi|29110 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 D-3-phosphoglycerate dehydrogenase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: EDA9 | EDA9 (embryo sac development arrest 9); NAD binding / amino acid binding / binding / catalytic/ cofactor binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor / phosphoglycerate dehydrogenase | chr4:16374 [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative phosphoglycerate dehydrogenase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • amino acid binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor / phosphoglycerate dehydrogenase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: EDA9 | EDA9 (embryo sac development arrest 9); NAD binding / amino acid binding / binding / catalytic/ cofactor binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor / phosphoglycerate dehydrogenase | chr4:16374045-16376565 REVERSE [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: EDA9 | D-3-phosphoglycerate dehydrogenase | chr4:16374041-16376561 REVERSE LENGTH=603 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • D-3-phosphoglycerate dehydrogenase OS=Arabidopsis thaliana GN=AT4g34200 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 603 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    mitochondrion [IDA]
    membrane [IDA]
    Biological Process: megagametogenesis [IMP]
    Molecular Function: ATP binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATAAASSS IAVATNSLRN VTLSSRSPLP SAISVAFPSR GRNTLQRRLV LVSCSTGDGS  60
   61 KPTILVAEKL GDAGIKLLED VANVDCSYNM TPEELNIKIS LCDALIVRSG TKVGREVFES 120
  121 SHGRLKVVGR AGVGIDNVDL SAATEFGCLV VNAPTANTIA AAEHGIALMA AMARNVAQAD 180
  181 ASVKAGEWKR NKYVGVSLVG KTLAVLGFGK VGTEVARRAK GLGMRVIAHD PYAPADRAHA 240
  241 IGVDLVSFDE ALATADFISL HMPLTPTTSK ILNDETFAKM KKGVRIVNVA RGGVIDEDAL 300
  301 VRALDAGIVA QAALDVFTKE PPAKDSKLVQ HERVTVTPHL GASTMEAQEG VAIEIAEAVV 360
  361 GALNGELAAT AVNAPMVSAE VLTELKPYVV LAEKLGRLAV QLVAGGSGVK NAKITYASAR 420
  421 ATDDLDTRLL RAMITKGIIE PISDVYVNLV NADFTAKQRG LRLSEERVLL DGSPESPLET 480
  481 ITVQLSNVES KFASSLSESG EVKVEGKVKD GVPHLTKVGS FEVDVTLEGS IILCRQVDQP 540
  541 GMIGTVGSIL GESNVNVNFM SVGRIAPRKQ AIMAIGVDDI PSKETLKKIG EIPAVEEFVF 600
  601 LKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..603] PSI-BLAST 112.0 Crystal Structure of D-3-Phosphoglycerate dehydrogenase From Mycobacterium tuberculosis


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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