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Protein Overview: gi|15983761, gi|...

General Information:
Name(s) found: gi|9755689 [NCBI NR]
gi|30686076 [NCBI NR]
gi|27311895 [NCBI NR]
gi|21537352 [NCBI NR]
gi|17065128 [NCBI NR]
gi|15983761 [NCBI NR]
gi|15237869 [NCBI NR]
gi|11358881 [NCBI NR]
Description(s) found:
Found 18 descriptions.
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  • gi|9755689|emb|CAC01701.1| TOM (target of myb1)-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30686076|ref|NP_850833.1| VHS domain-containing protein / GAT domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|27311895|gb|AAO00913.1| TOM (target of myb1)-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21537352|gb|AAM61693.1| TOM (target of myb1)-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17065128|gb|AAL32718.1| TOM (target of myb1)-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15983761|gb|AAL10477.1| AT5g16880/F2K13_30 [Arabidopsis thaliana] [NCBI NR]
  • gi|15237869|ref|NP_197190.1| VHS domain-containing protein / GAT domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T51543 TOM (target of myb1)-like protein - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 407 amino acids

    Gene Ontology:
    Cellular Component: Golgi stack [ISS]
    plasma membrane [IDA]
    Biological Process: intra-Golgi vesicle-mediated transport [ISS]
    intracellular protein transport [IEA][ISS]
    Molecular Function: protein transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDNLMDKVT AFGERLKIGG SEVSNKISAG VSSMSFKVKE LFQGPNPTDK IVEDATTENL  60
   61 EEPDWDMNLE ICDMINQETI NSVELIRGIK KRIMMKQPRI QYLALVLLET CVKNCEKAFS 120
  121 EVAAERVLDE MVKLIDDPQT VVNNRNKALM LIEAWGESTS ELRYLPVFEE TYKSLKARGI 180
  181 RFPGRDNESL APIFTPARST PAPELNADLP QHVHEPAHIQ YDVPVRSFTA EQTKEAFDIA 240
  241 RNSIELLSTV LSSSPQHDAL QDDLTTTLVQ QCRQSQTTVQ RIIETAGENE ALLFEALNVN 300
  301 DELVKTLSKY EEMNKPSAPL TSHEPAMIPV AEEPDDSPIH GREESLVRKS SGVRGGFHGG 360
  361 GGSGDDMMDD LDEMIFGKKN GCDSSTNPDH DPKKEQSSSK NDDLIRF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] PSI-BLAST 45.69897 Hrs
    2 View Details [288..407] PSI-BLAST 21.0 ADP-ribosylation factor binding protein Gga1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.24093737575291 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle