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Protein Overview: gi|30690520, gi|...

General Information:
Name(s) found: gi|30690520 [NCBI NR]
gi|24762205 [NCBI NR]
gi|24429606 [NCBI NR]
gi|20197321 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|30690520|ref|NP_850461.1| CCA1 (CIRCADIAN CLOCK ASSOCIATED 1); DNA binding / transcription activator/ transcription factor/ transcription repressor [Arabidopsis thaliana] [NCBI NR]
  • gi|24762205|gb|AAN64169.1| putative MYB-related transcription factor CCA1 [Arabidopsis thaliana] [NCBI NR]
  • gi|24429606|gb|AAN61004.1| putative MYB-related transcription factor CCA1 [Arabidopsis thaliana] [NCBI NR]
  • gi|20197321|gb|AAM15022.1| MYB-related transcription factor (CCA1); identical to GB:U28422 supported by cDNA: gi_15293054_gb_AY050961 1_ [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 526 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQALDIAIP PPRPKRKPNN PYPRKTGSGT ILMSKTGVND GKESLGSEKV SHPEMANEDR  60
   61 QQSKPEEKTL QEDNCSDCFT HQYLSAASSM NKSCIETSNA STFREFLPSR EEGSQNNRVR 120
  121 KESNSDLNAK SLENGNEQGP QTYPMHIPVL VPLGSSITSS LSHPPSEPDS HPHTVAGDYQ 180
  181 SFPNHIMSTL LQTPALYTAA TFASSFWPPD SSGGSPVPGN SPPNLAAMAA ATVAAASAWW 240
  241 AANGLLPLCA PLSSGGFTSH PPSTFGPSCD VEYTKASTLQ HGSVQSREQE HSEASKARSS 300
  301 LDSEDVENKS KPVCHEQPSA TPESDAKGSD GAGDRKQVDR SSCGSNTPSS SDDVEADASE 360
  361 RQEDGTNGEV KETNEDTNKP QTSESNARRS RISSNITDPW KSVSDEGRIA FQALFSREVL 420
  421 PQSFTYREEH REEEQQQQEQ RYPMALDLNF TAQLTPVDDQ EEKRNTGFLG IGLDASKLMS 480
  481 RGRTGFKPYK RCSMEAKESR ILNNNPIIHV EQKDPKRMRL ETQAST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..69] MSA 1.01199 View MSA. No confident structure predictions are available.
    2 View Details [70..173] deduced N/A No confident structure predictions are available.
    3 View Details [174..229] MSA 2.014986 View MSA. No confident structure predictions are available.
    4 View Details [230..396] MSA 1.013987 View MSA. No confident structure predictions are available.
    5 View Details [397..526] MSA 3.015973 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.54

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle