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Protein Overview: PPH_ARATH

General Information:
Name(s) found: PPH_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Pheophytinase, chloroplastic OS=Arabidopsis thaliana GN=PPH PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 484 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: chlorophyll catabolic process [IMP]
    Molecular Function: pheophytinase activity [IDA]
    hydrolase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIISLNVVP QCSVVTWSSK LATKRLVPNR SSLLFSGVKK SRLVIRSGNS DGYVVGENDD  60
   61 LGRIARRGES TSKVLIPGLP DESNGEIAAR ISHSHCEWKP KLRVHYEKAG CDNLDAPAVL 120
  121 FLPGFGVGSF HYEKQLTDLG RDYRVWAIDF LGQGLSLPTE DPTTMTEETS SSEDKEPFWG 180
  181 FGDKTEPWAD QLVFSLDLWR DQVQYFVEEV IGEPVYIAGN SLGGYVALYF AATHPHLVKG 240
  241 VTLLNATPFW GFFPNPVRSP KLARLFPWPG AFPLPERVKK ITELVWQKIS DPESIAEILK 300
  301 QVYTDHSINV DKVFSRIVEV TQHPAAAASF ASIMLAPGGE LSFSEALSRC KENNVQICLM 360
  361 YGREDPWVRP LWGKKIKKEI PNAPYYEISP AGHCPHDEVP EVVNYLMRGW IKHLESGGFE 420
  421 ALPLLEDTEE DWEESRIGRE IEFPRDGWKK AVNLWLYGSN YTYWRGVRES FRSSFIRVFG 480
  481 GKSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..484] PSI-BLAST 50.154902 Human soluble Epoxide Hydrolase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.866238607554457 bayes_pls_golite062009
  • hydrolase activity
    		•  0.52702612560045 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle