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Protein Overview: NADC_ARATH

General Information:
Name(s) found: NADC_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic OS=Arabidopsis thaliana GN=QPT PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 348 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: NAD biosynthetic process [IGI][IMP]
    Molecular Function: nicotinate-nucleotide diphosphorylase (carboxylating) activity [IGI][IMP][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISVSRFLSP QFYAIPRSFV KMSASATQTA GEVSMGIKPP SHPTYDLKAV IKLALAEDAG  60
   61 HTGDVTCMAT IPFDMEVEAY FLAKEDGIVA GVALADMIFE HVDPSLKVEW MRKDGDYVHK 120
  121 GLKFGKVSGN AHKIVVAERV LLNFMQRMSG IATLTKLMAD AASPACILET RKTAPGLRLV 180
  181 DKWAVLIGGG RNHRMGLFDM VMIKDNHISA AGGIVNAVKS VDEYLKQKNL EMDVEVETRT 240
  241 LEEVKEVLEY ASGSETRLTR IMLDNMVVPL ENGDVDVTML KDAVELINGR FETEASGNVT 300
  301 LETVHKIGQS GVTFISSGAL THSVKALDIS LKIDTELALE VGRRTKRA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..348] PSI-BLAST 82.09691 Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain; Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nicotinate phosphoribosyltransferase activity
    		•  3.4096751090496 bayes_pls_golite062009
  • nicotinate-nucleotide diphosphorylase (carboxylating) activity
    		•  3.12788282156037 bayes_pls_golite062009
  • binding
    		•  1.58263447797054 bayes_pls_golite062009
  • catalytic activity
    		•  0.60409960326459 bayes_pls_golite062009
  • protein binding
    		•  0.502035039039958 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle