YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: AGD5_ARATH

General Information:
Name(s) found: AGD5_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • Probable ADP-ribosylation factor GTPase-activating protein AGD5 OS=Arabidopsis thaliana GN=AGD5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 483 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    trans-Golgi network [IDA]
    endosome [IDA]
    cytosol [IDA]
    Biological Process: activation of ARF GTPase activity [IDA]
    floral organ abscission [IMP]
    Molecular Function: DNA binding [ISS]
    zinc ion binding [IEA]
    ARF GTPase activator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEKANVSKE LNARHRKILE GLLKHPENRE CADCKTKGPR WASVNLGIFI CMQCSGIHRS  60
   61 LGVHISKVRS ATLDTWLPEQ VAFIQSMGND KANSYWEAEL PPNYDRVGIE NFIRAKYEEK 120
  121 RWVSRGEKAR SPPRVEQERR KSVERSGPGY EHGHSSSPVN LFEERKTIPA SRTRNNVAAT 180
  181 RINLPVPPQG PSQVIKPQQK MESAATPVER EKQAVNVAPA SDPPKVDFAT DLFNMLSMDD 240
  241 STTNTSEATP GDTPADDNSW AGFQSAGSGQ TAEKIVTAKP AESSSPPASS SDFEDLFKDT 300
  301 PNLTTQQAPK DVKGDIMSLF EKTNIVSPFA MHQQQVAMLA QQQALYMAAA KAAGGTPNGV 360
  361 NQQAIANALN VASANWSNPG GYQIPGMTNP VGGQADLQKL MQNMNMNANM NTRPAQPQEN 420
  421 TLQYPSSSFY TMGQANQVNG MTPNSTGKPQ SSSATQPTST TPSSQSGKDF DFSSLMDGMF 480
  481 TKH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] PSI-BLAST 46.522879 Solution structure of ArfGap domain from human SMAP1
    2 View Details [123..305] FFAS03 1.4 No description for 2j63A was found.
    3 View Details [306..483] PSI-BLAST 4.522879 Sec24


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle