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Protein Overview: VPS11_ARATH

General Information:
Name(s) found: VPS11_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Vacuolar protein-sorting-associated protein 11 homolog OS=Arabidopsis thaliana GN=VPS11 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 932 amino acids

    Gene Ontology:
    Cellular Component: plant-type vacuole membrane [IDA]
    Biological Process: vacuole organization [TAS]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]
    binding [IEA]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQLRKFDFF EEKYGGKIPE DVTGDIQCCS SGRGKVVIGS NDGSVSFLDR GVKFDSGFQA  60
   61 HSSSVLFLQH LKQRNFLVTV GEDEQISPQQ SGMCLKVFDL DKVQEEGTSS SAPECIGILR 120
  121 IFTNQFPEAK ITSFLVLEEV PPILLIAIGL DNGCIYCVKG DIARERITRF KLQVDGRSAI 180
  181 TGLGFRMDGQ ALLLFAVTPE SVNLFSMQAQ PPKLQTLDHI GGSVNTVTMS DRSELIVGRP 240
  241 EAVYFYEVDG RGPCWAFEGE KKFMGWFRGY LLCVIDDSKT GNTVFNVYDL RNRLIAYSIV 300
  301 VDKVSNMLCE WGNIILIKAD KSLLCITEKD MESKLDMLFK KNLYTVAINL VQSQHADAAA 360
  361 TANVMRKYGD HLYGKQDFDE AMLQYINTIG YLEPSFVIQK FLDAQRIYNL TNYLEKLHEK 420
  421 GLASKDHTTL LLNCYTKLKD VEKLNTFIRK EDGIGELKFD VETAIRVCRA ANYHEHAMYV 480
  481 AKKAGKHEWY LKILLEDLGN YDEALQYVSS LEPSQAGVTI EQYGKILIEH KPKETIDILM 540
  541 RLCTEQGIPN GVFLSMLPSP VDFITVFVQH PHSLMHFLER YAEIVQDSPA QAEINNTLLE 600
  601 LYLSRDLNFP SISLSENGLD KDLIDHSVAA AVSKADPEKK TNADSKDAME KDCTERQQKG 660
  661 LELLKMAWPS DLEQPLYDVD LAVILCEMNS FKDGLLYLYE KMKFYKEVIA CYMQNHDHEG 720
  721 LIACCKRLGD SSKGGDPSLW ADLLKYFGEI GEDCTKEVKE VLTYIERDDI LPPIIVLQTL 780
  781 AKNPCLTLSV IKDYIARKLE QESKIIEEDR RAVEKYQETT KNMRKEIEDL RTNARIFQLS 840
  841 KCTACTFTLD IPAVHFMCMH SFHQRCLGDN EKECPECAPE YRSVMEMKRS LEQNSKDQDL 900
  901 FFQQVKGSKD GFSVIAEYFG KGIISKTRDA TS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..376] PSI-BLAST 45.522879 No description for 2gnqA was found.
    2 View Details [377..932] PSI-BLAST 62.221849 Clathrin D6 Coat


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle