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Protein Overview: AFP1_ARATH

General Information:
Name(s) found: AFP1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75180099|sp|Q9LQ98.1|U7371_ARATH RecName: Full=UPF0737 protein AFP1; AltName: Full=ABI five-binding protein 1; Short=ABI5-binding protein 1 [NCBI NR]
  • gi|6730641|gb|AAF27062.1|AC008262_11 F4N2.22 [Arabidopsis thaliana] [NCBI NR]
  • gi|23197982|gb|AAN15518.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22531038|gb|AAM97023.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18409228|ref|NP_564956.1| AFP1 (ABI FIVE BINDING PROTEIN) [Arabidopsis thaliana] [NCBI NR]
  • UPF0737 protein AFP1 OS=Arabidopsis thaliana GN=AFP1 PE=1 SV=1 [Swiss-Prot]
  • Ninja-family protein AFP1 OS=Arabidopsis thaliana GN=AFP1 PE=1 SV=1 [Swiss-Prot]
  • (Q9LQ98) F4N2.22 (Expressed protein) [athaliana3702.FASTAC.txt]
  • expressed protein [Arabidopsis thaliana]gi|22531038|gb|AAM97023.1| expressed protein [Arabidopsis thaliana]gi|6730641|gb|AAF27062.1| F4N2.22 [Arabidopsis thaliana]gi|18409228|ref|NP_564956.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41856.1); contains InterPro domain Protein of unknown function DUF1675 (InterPro:IPR012463) | chr1:26042977-2604 [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • F4N2.22 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41856.1); contains InterPro domain Protein of unknown function DUF1675 (InterPro:IPR012463) | chr1:26042977-26044233 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: AFP1 | ABI five binding protein | chr1:26039314-26040570 FORWARD LENGTH=345 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 345 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    Biological Process: abscisic acid mediated signaling pathway [TAS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEANERSKE MARSNSCVFP RDLLQRFISN SVEGEDDDEE EDDDEIELNL GLSLGGRFGV  60
   61 DKSNKLVRSS SVVVTMPLFR EDHHHHQAAA MITTKVSTET VAGATRGTGL MRTTSLPAES 120
  121 EEEWRKRKEM QTLRRMAAKR RRSEKLRTGV GGGNSNNPEE AATATASRRR GRPSSGLPRW 180
  181 SATANKSGLL RQHSAGLDSL QVSGESLGGG RAAGSSSSVS ELETKASSDE ARSLPSTTQP 240
  241 QQETTTKPTN RLRRLSSVDM NMKMEPQGKG KSEMPCVFTK GDGPNGKRVD GILYRYGSGE 300
  301 EVRIMCVCHG DFLSPADFVK HAGGPHVDHP LRHIVVNTSS PSNLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] MSA 1.010977 View MSA. No confident structure predictions are available.
    2 View Details [209..345] MSA 3.014973 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle