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Protein Overview: gi|22135900, gi|...

General Information:
Name(s) found: gi|6996305 [NCBI NR]
gi|24899697 [NCBI NR]
gi|22135900 [NCBI NR]
gi|15231733 [NCBI NR]
gi|11292163 [NCBI NR]
Description(s) found:
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  • gi|6996305|emb|CAB75466.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|24899697|gb|AAN65063.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22135900|gb|AAM91532.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231733|ref|NP_191528.1| IQD13 (IQ-domain 13); calmodulin binding [Arabidopsis thaliana] [NCBI NR]
  • pir||T49310 hypothetical protein T16L24.240 - Arabidopsis thaliana [NCBI NR]
  • (Q9M199) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|6996305|emb|CAB75466.1| putative protein [Arabidopsis thaliana]gi|11292163|pir||T49310 hypothetical protein T16L24.240 - Arabidopsis thalianagi|15231733|ref|NP_191528.1| calmodulin-binding family protein [Arabi [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Calmodulin-binding family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: IQD13 | IQD13 (IQ-domain 13); calmodulin binding | chr3:22060549-22062456 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • calmodulin binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: IQD13 | IQ-domain 13 | chr3:22049572-22051479 FORWARD LENGTH=517 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Protein IQ-domain 13 OS=Arabidopsis thaliana GN=T16L24.240 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 517 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: NONE FOUND
    Molecular Function: calmodulin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKGSWFSA IKRVFTPHSK EKQLSNNNQE PEIKSENKEK KKKGFGKKLR NGETNSFLPI  60
   61 FRQPSSIEKI LSEAEREHNL VFRPPTPTDR ANSSSTSVAS PLVRPASPKV PSQRYVSSPK 120
  121 PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR 180
  181 GYMARRSFRA LKGLVRLQGV VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR 240
  241 NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS 300
  301 AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS 360
  361 SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD DDSLTSCPPF SAPSYMAPTV 420
  421 SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG 480
  481 AVVLEKHKTL KSVGNLSIDS TVSMPATIGR RAFNRFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] FFAS03 1.8 No description for 2j63A was found.
    2 View Details [154..402] PSI-BLAST 33.154902 No description for 2dfsA was found.
    3 View Details [403..517] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle