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Protein Overview: MED14_ARATH

General Information:
Name(s) found: MED14_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6175174|gb|AAF04900.1|AC011437_15 hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23898273|emb|CAD53582.1| struwwelpeter 1 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20068999|gb|AAM09647.1|AF466359_1 SWP1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15229344|ref|NP_187125.1| SWP (STRUWWELPETER) [Arabidopsis thaliana] [NCBI NR]
  • Mediator of RNA polymerase II transcription subunit 14 OS=Arabidopsis thaliana GN=MED14 PE=1 SV=1 [Swiss-Prot]
  • (Q9SR02) F7O18.23 protein (SWP1) (Struwwelpeter 1 protein) [athaliana3702.FASTAC.txt]
  • hypothetical protein [Arabidopsis thaliana]gi|23898273|emb|CAD53582.1| struwwelpeter 1 protein [Arabidopsis thaliana]gi|20068999|gb|AAM09647.1| SWP1 [Arabidopsis thaliana]gi|15229344|ref|NP_187125.1| expressed protein (SWP1) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein (SWP1) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: MED14, SWP | SWP (STRUWWELPETER) | chr3:1294043-1300561 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • SWP1 [Arabidopsis thaliana] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • struwwelpeter 1 protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SWP (STRUWWELPETER) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SWP, MED14, ATMED14 | RNA polymerase II transcription mediators | chr3:1294037-1300555 FORWARD LENGTH=1703 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1703 amino acids

    Gene Ontology:
    Cellular Component: mediator complex [ISS]
    Biological Process: positive regulation of cell proliferation [IMP]
    positive regulation of transcription [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELGQQTVD FSALVGRAAE ESFLSFKELV DKSKSTELSD TEKKVSLLKY VAKTQQRMLR  60
   61 LNALAKWCKQ VPLINYFQDL GSTLSAHDIC FTQAADSLFF MHEGLQQARA PVYDVPSAVE 120
  121 ILLTGSYQRL PKCLDDVGMQ SSLDEHQQKP ALRKLEVLVR SKLLEITLPK EITEVKISKG 180
  181 TVTLSVDGEF KVLVTLGYRG HLSMWRILHL DLLVGERSGP IKLEVTRRHI LGDDLERRMS 240
  241 VAENPFTILY AVLHELCVAI VMDTVIRQVR ALLQGRWKDA IRFDLISDTG TTPANQEGEA 300
  301 DSVSLRTPGM KLFYWSDSDK NSGPFIKIEP GSDLQIKCSH STFVIDPLTG KEAEFSLDQS 360
  361 CIDVEKLLLK AICCNRYTRL LEIQKELLRN TRICRTPSDV ILQALLDEPG IEGDNMVDSK 420
  421 ERVEPEVLRV RAYGSSFFTL GINIRTGRFL LQSSKSILTS SILEEFEDAL NQGSISAVDA 480
  481 FINLRSKSIL HFFAAIGKFL GLEVYEHGFG INKVPKSLLD GSSILTLGFP DCESSHLLLM 540
  541 ELEKDFTPLF KLLETQMDGS GKPQSFNDPS NILRAKKIDI GQIRILEDDL NLITSDVVKF 600
  601 VSSFSDAEGI NQASGHRQPG LVDEALTEMS GSQLSFSSVV DGVFGLQKVT SALMSIDGHG 660
  661 LVPKNLSAVT GHGKAPMLTS YHSDSLYNRQ GPLQSSSYNM LSSPPGKGSA MKKIAISNSD 720
  721 QELSLILSPS LSTGNGVSES GSRLVTESSL SPLPLSQTAD LATSSAGPLL RKDQKPRKRS 780
  781 ASDLLRLIPS LQVVEGVASP NKRRKTSELV QSELVKSWSP ASQTLSTAVS TSTKTIGCSY 840
  841 GNLIAEANKG NAPSSVFVYA LLHVVRHSSL SIKHAKLTSQ MEALDIQYVE EMGLRDAFSD 900
  901 IWFRLPFAQN DSWQHICLQL GRPGSMCWDV KINDQHFRDL WELQKGSKTT PWGSGVHIAN 960
  961 SSDVDSHIRY DPEGVVLSYQ SVEADSIKKL VADIQRLSNA RMFSLGMRKL LGIKPDEKTE1020
 1021 ECSANSTMKG STGGKGSGEP VDRWRAFKIE AVGLTSLWFS FGSGVLARFV VEWESGKDGC1080
 1081 TMHVSPDQLW PHTKFLEDFI NGAEVESLLD CIRLTAGPLH ALAAATRPAR ASTATGMPVV1140
 1141 PATASSRQSN QIQQTQGIIA PSTLAAPNAT GQSASATSGN TVASSAPSPL GGGFHGVAML1200
 1201 AAAGRSGPGI VPSSLLPIDV SVVLRGPYWI RIIYRKRFAV DMRCFAGDQV WLQPATPPKG1260
 1261 GASIGGSLPC PQFRPFIMEH VAQELNGLEP NLTGSQGATN PNSGNPTVNG VNRVNFSPSS1320
 1321 ARAAMNRVAS VASGSLVVSS GLPVRRTPGT AVPAHVRGEL NTAIIGLGDD GGYGGGWVPL1380
 1381 VALKKVLRGI LKYLGVLWLF AQLPDLLREI LGSILKDNEG ALLNLDQEQP ALRFFVGGYV1440
 1441 FAVSVHRVQL LLQVLSVRRF HHQAQQNGSS AAAQEELTQS EIGEICDYFS RRVASEPYDA1500
 1501 SRVASFITLL TLPISVLREF LKLIAWKKGL SQSQQAGEIA PAQRPRIELC LENHSGTDLD1560
 1561 NNCAAKSNIH YDRPHNTVDF ALTVVLDPVH IPHINAAGGA AWLPYCVSVR LRYTFGENPS1620
 1621 VTFLGMEGSH GGRACWQRVD DWEKCKQRVS RTVEVNGSAA GDLTQGKLKL VADSVQRTLH1680
 1681 LCLQGLREGG NNNNNTHQKE FTI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..199] Pfam 65.552842 No description for PF08638.3 was found. No confident structure predictions are available.
    2 View Details [200..409] MSA 1.043975 View MSA. No confident structure predictions are available.
    3 View Details [410..622] deduced N/A No confident structure predictions are available.
    4 View Details [623..751] deduced N/A No confident structure predictions are available.
    5 View Details [752..951] deduced N/A No confident structure predictions are available.
    6 View Details [952..1186] deduced N/A No confident structure predictions are available.
    7 View Details [1187..1316] deduced N/A No confident structure predictions are available.
    8 View Details [1317..1426] deduced N/A No confident structure predictions are available.
    9 View Details [1427..1598] deduced N/A No confident structure predictions are available.
    10 View Details [1599..1703] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle