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Protein Overview: CCT1_ARATH

General Information:
Name(s) found: CCT1_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Choline-phosphate cytidylyltransferase 1 OS=Arabidopsis thaliana GN=CCT1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 332 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biosynthetic process [IEA][ISS]
    Molecular Function: choline-phosphate cytidylyltransferase activity [ISS]
    nucleotidyltransferase activity [IEA]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNVIGDRTE DGLSTAAAAS GSTAVQSSPP TDRPVRVYAD GIYDLFHFGH ARSLEQAKLA  60
   61 FPNNTYLLVG CCNDETTHKY KGRTVMTAEE RYESLRHCKW VDEVIPDAPW VVNQEFLDKH 120
  121 QIDYVAHDSL PYADSSGAGK DVYEFVKKVG RFKETQRTEG ISTSDIIMRI VKDYNQYVMR 180
  181 NLDRGYSRED LGVSFVKEKR LRVNMRLKKL QERVKEQQER VGEKIQTVKM LRNEWVENAD 240
  241 RWVAGFLEIF EEGCHKMGTA IVDSIQERLM RQKSAERLEN GQDDDTDDQF YEEYFDHDMG 300
  301 SDDDEDEKFY DEEEVKEEET EKTVMTDAKD NK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] PSI-BLAST 30.221849 CTP:glycerol-3-phosphate cytidylyltransferase
    2 View Details [185..332] MSA 1.682991 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.84668360172717 bayes_pls_golite062009
  • ligase activity
    		•  0.41353894226697 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  0.1911539125531 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  0.1911539125531 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  0.178548924377401 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle