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Protein Overview: gi|9758460, gi|2...

General Information:
Name(s) found: gi|9758460 [NCBI NR]
gi|23296841 [NCBI NR]
gi|18414711 [NCBI NR]
gi|13877957 [NCBI NR]
Description(s) found:
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  • gi|9758460|dbj|BAB08989.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|23296841|gb|AAN13183.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18414711|ref|NP_568143.1| VPS60.2 [Arabidopsis thaliana] [NCBI NR]
  • gi|13877957|gb|AAK44056.1|AF370241_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9FMC5) Genomic DNA, chromosome 5, P1 clone:MUK11 (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|13877957|gb|AAK44056.1| unknown protein [Arabidopsis thaliana]gi|9758460|dbj|BAB08989.1| unnamed protein product [Arabidopsis thaliana]gi|18414711|ref|NP_568143.1| SNF7 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 SNF7 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: VPS60.2 | VPS60.2 | chr5:1408247-1409807 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: VPS60.2 | SNF7 family protein | chr5:1408246-1409806 REVERSE LENGTH=235 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Charged multivesicular body protein 5 OS=Arabidopsis thaliana GN=VPS60.2 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4JXR3, Putative uncharacterized protein At5g04850 OS=Arabidopsis thaliana GN=VPS60.2 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 235 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: vesicle-mediated transport [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRIFGAKNN KEPPPSIQDA SDRINKRGDS VEEKVKRLDA ELCKYKDQIK RTRPGPALEA  60
   61 IKARAMRVLK QKKMYEGQRD MLYNQTFNLD QVSFAAEGLK DAQQTMTALK SANKELKGMM 120
  121 KTVKIQDIDN LQDDMMDLMD ESSEIQETLG RSYNVPDDID EDDLLGELDA LEADMGNETE 180
  181 ADGVPSYLQP DKEPDLNDEL NLPSAPMGHT GAPPGRAQAE DEWGLPAVPR ASLRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] PSI-BLAST 16.69897 No description for 2gd5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle